Detailed information NTG0731227

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: N5980_RS01125
• Genome accession: NZ_CP104651
• Coordinates: 241826..242965 (-)
• Length: 379 a.a.
• NCBI ID: WP_175966351.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain 2021CK-01005
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 236826..247965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5980_RS01095 (N5980_01095)	-	237094..237699 (-)	606	WP_175966359.1	hypothetical protein	-
N5980_RS01100 (N5980_01100)	-	237864..238241 (-)	378	WP_104426930.1	RcnB family protein	-
N5980_RS01105 (N5980_01105)	-	238450..238995 (-)	546	WP_175966357.1	glutathione peroxidase	-
N5980_RS01110 (N5980_01110)	-	239169..239714 (-)	546	WP_104426931.1	glutathione peroxidase	-
N5980_RS01115 (N5980_01115)	-	239906..240817 (+)	912	WP_175966355.1	DMT family transporter	-
N5980_RS01120 (N5980_01120)	-	241216..241785 (-)	570	WP_175966353.1	Sua5/YciO/YrdC/YwlC family protein	-
N5980_RS01125 (N5980_01125)	dprA	241826..242965 (-)	1140	WP_175966351.1	DNA-processing protein DprA	Machinery gene
N5980_RS01130 (N5980_01130)	tsaP	243023..244177 (-)	1155	WP_175966349.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
N5980_RS01135 (N5980_01135)	def	244298..244828 (+)	531	WP_175966347.1	peptide deformylase	-
N5980_RS01140 (N5980_01140)	-	244921..245331 (+)	411	WP_104426935.1	DUF2946 family protein	-
N5980_RS01145 (N5980_01145)	-	245403..247400 (+)	1998	WP_175966345.1	TonB-dependent copper receptor	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 42727.54 Da
• Isoelectric Point: 6.8113

>NTDB_id=731227 N5980_RS01125 WP_175966351.1 241826..242965(-) (dprA) [Acinetobacter variabilis strain 2021CK-01005]
MLNSLSRVQLETLTLWYLVQHSLSSFYKISQHYSSLTTAIQPDQVPTWQALGIHANHVQRLKDFSLPESQQKFQRCLEKV
QRDSDFVLLYHDLHYPQQLSHYVDKPPIIFGQGQPDTLLQAQIAVVGSRKPSPHGRQVAYDFSFYLSEQGFYINSGLAQG
IDEAAHRAGLKHQGTIAVMGTGLDQTYPSQHAQLRQEIIAHGGAVITEFLPETPPLQHHFPRRNRIVSGLSLGVIVAEAT
LKSGSLITAKLAAEQGKTVFAIPGHIYSEYHKGCHQLIREGAILIDHPQQVIEELALATQWQALQNEVQHDMADELPTHI
PPHLLRLYNQLDWVGQDLDHLSHHLQQDVSSLTGQLMELELLGFCTQQAGMYLRCRPHK

Nucleotide

• Length: 1140 bp

>NTDB_id=731227 N5980_RS01125 WP_175966351.1 241826..242965(-) (dprA) [Acinetobacter variabilis strain 2021CK-01005]
ATGCTGAACTCTTTATCACGCGTGCAACTGGAAACACTGACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGCTTCTA
TAAAATCAGTCAGCATTATTCAAGTCTGACCACAGCCATACAGCCTGATCAGGTGCCTACCTGGCAGGCGCTTGGCATTC
ATGCCAATCATGTCCAACGCTTAAAAGACTTCTCGCTTCCAGAATCACAACAGAAATTTCAGCGCTGTCTGGAAAAAGTT
CAGCGAGATAGTGATTTTGTTCTACTCTACCATGATCTGCACTATCCGCAGCAACTCAGCCACTATGTAGACAAACCACC
GATTATTTTTGGCCAAGGTCAGCCGGATACCCTGCTACAAGCCCAAATTGCAGTTGTGGGAAGTCGCAAGCCTAGTCCTC
ATGGCCGGCAAGTAGCTTATGATTTTTCCTTTTATTTGAGTGAACAGGGTTTCTATATTAATAGTGGATTAGCACAAGGC
ATAGATGAAGCTGCTCATCGGGCAGGATTAAAACATCAGGGAACCATTGCGGTGATGGGAACCGGACTGGATCAGACCTA
CCCTTCTCAACATGCACAATTGCGCCAGGAGATTATTGCGCATGGTGGTGCCGTCATTACCGAGTTTCTACCAGAAACCC
CACCGTTGCAGCATCACTTTCCACGGCGTAACAGGATTGTCAGTGGCTTAAGTCTCGGGGTCATTGTGGCTGAAGCGACC
TTAAAAAGCGGCTCTCTGATTACGGCCAAACTGGCTGCCGAACAAGGCAAGACTGTATTTGCCATTCCGGGACATATTTA
TAGTGAATATCATAAAGGTTGCCATCAGCTGATTCGTGAAGGCGCGATTCTGATTGATCACCCGCAACAGGTGATTGAAG
AACTGGCTCTGGCAACCCAATGGCAAGCCTTACAAAATGAAGTACAACATGACATGGCGGATGAACTTCCTACACACATA
CCGCCCCATTTGCTCAGACTTTATAACCAGCTGGACTGGGTCGGACAGGATCTGGATCATCTCAGTCATCATCTGCAACA
GGATGTTTCTTCTCTCACCGGTCAATTGATGGAACTGGAGCTACTTGGCTTTTGCACCCAGCAAGCCGGCATGTATCTAC
GTTGTCGTCCGCATAAATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (326-371)

• DNA recombination-mediator protein A (DNA_processg_A) (86-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Acinetobacter baumannii strain A118	63.298	99.208	0.628
dprA	Acinetobacter baumannii D1279779	62.5	99.208	0.62
dprA	Acinetobacter baylyi ADP1	59.474	100	0.596
dprA	Vibrio cholerae strain A1552	40.533	89.182	0.361