Detailed information NTG0728097

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: N0D28_RS14575
• Genome accession: NZ_CP104213
• Coordinates: 2851061..2852140 (-)
• Length: 359 a.a.
• NCBI ID: WP_260560205.1
• Uniprot ID: -
• Organism: Deinococcus rubellus strain Ant6
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2846061..2857140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0D28_RS14545 (N0D28_14545)	-	2846234..2846845 (-)	612	WP_260560199.1	class I SAM-dependent methyltransferase	-
N0D28_RS14550 (N0D28_14550)	-	2846823..2847857 (-)	1035	WP_260560200.1	HNH endonuclease domain-containing protein	-
N0D28_RS14555 (N0D28_14555)	-	2847963..2848172 (-)	210	WP_260560201.1	SOS response-associated peptidase	-
N0D28_RS14560 (N0D28_14560)	-	2848893..2849090 (-)	198	WP_260560202.1	hypothetical protein	-
N0D28_RS14565 (N0D28_14565)	-	2849131..2850273 (-)	1143	WP_260560203.1	IS3 family transposase	-
N0D28_RS14570 (N0D28_14570)	-	2850387..2850857 (-)	471	WP_260560204.1	helix-turn-helix domain-containing protein	-
N0D28_RS14575 (N0D28_14575)	comM	2851061..2852140 (-)	1080	WP_260560205.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
N0D28_RS14580 (N0D28_14580)	-	2852262..2852849 (-)	588	WP_260560206.1	DedA family protein	-
N0D28_RS14585 (N0D28_14585)	-	2852946..2854637 (-)	1692	WP_260560207.1	peptide chain release factor 3	-
N0D28_RS14590 (N0D28_14590)	-	2854794..2855711 (-)	918	WP_260560208.1	histone deacetylase	-

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 37382.96 Da
• Isoelectric Point: 6.9229

>NTDB_id=728097 N0D28_RS14575 WP_260560205.1 2851061..2852140(-) (comM) [Deinococcus rubellus strain Ant6]
MLATARSAALIGVDAVLVTVEVDVSPGLPAFNIVGLPDQAVSEARERVRAAIRNSGLPFPAARITVNLAPADLRKEGPMY
DLPIALGLLAAQELLPAGALGGTLLAGELALDGSVRPIGGAVNLALLASQERLDVLLGEGNASEAALIDGVKVYPSRTLR
EALHHLSGLAVLTPAEAPEHSDDGPAPLDLADLKGQGQARRALEIALAGGHNLLLVGSPGSGKTMLARRAPGLLPQLTRA
EALEVTRIHSAAGLTSQRSGLIRTPPYRSPHHTVSDAGLIGGGSIPRPGEVSLAHRGVLFLDEFPEFSRKALETLRQPLE
DGEVTISRARASLRYPARFQLIAAMNPCPYGSQSVFKAA

Nucleotide

• Length: 1080 bp

>NTDB_id=728097 N0D28_RS14575 WP_260560205.1 2851061..2852140(-) (comM) [Deinococcus rubellus strain Ant6]
ATGCTCGCCACCGCCCGCAGCGCCGCCCTCATCGGGGTGGACGCTGTGCTGGTCACCGTGGAGGTGGATGTGTCGCCGGG
CCTGCCCGCCTTCAACATCGTCGGTCTGCCGGATCAGGCGGTCAGCGAGGCGCGCGAGCGGGTGCGGGCGGCAATTCGCA
ACAGTGGCCTGCCCTTCCCGGCGGCCCGCATCACCGTCAACCTCGCGCCTGCCGATCTACGCAAGGAAGGCCCGATGTAC
GACCTGCCGATTGCCCTGGGCCTGCTGGCCGCCCAGGAACTGCTGCCCGCCGGAGCACTTGGCGGCACGCTACTGGCCGG
TGAACTGGCGCTCGACGGCAGCGTGCGGCCCATCGGCGGGGCGGTGAATCTGGCGCTGCTGGCCTCGCAGGAGCGGCTGG
ACGTCCTGCTGGGCGAGGGCAATGCCAGCGAGGCTGCCCTGATCGACGGCGTGAAGGTGTACCCGTCCCGCACCCTGCGC
GAAGCCTTGCATCACCTCTCGGGCCTTGCAGTCCTGACGCCTGCCGAAGCACCTGAGCACTCCGATGACGGCCCCGCGCC
GCTCGATCTGGCTGATCTCAAGGGGCAGGGACAGGCGCGCCGGGCGCTGGAAATCGCGCTGGCCGGTGGACACAACCTCT
TACTCGTTGGTTCGCCCGGCAGCGGCAAGACCATGCTGGCCCGCCGCGCGCCGGGGCTGTTGCCGCAGCTCACCCGCGCC
GAGGCGCTGGAAGTCACCCGCATCCACTCGGCGGCGGGCCTGACCAGCCAGCGCAGCGGCCTGATCCGCACCCCACCCTA
CCGCAGTCCCCACCACACCGTCTCAGACGCGGGCCTGATCGGTGGCGGAAGCATTCCCCGGCCCGGCGAGGTCAGCCTGG
CGCACCGGGGCGTGTTGTTTCTGGATGAATTTCCGGAGTTCTCGCGCAAAGCTCTGGAAACCCTGCGCCAGCCTCTGGAA
GACGGTGAGGTTACCATCAGTCGGGCGCGGGCCAGCCTGCGCTACCCGGCCCGCTTTCAGCTCATCGCCGCCATGAATCC
GTGCCCCTACGGTTCACAATCTGTATTCAAAGCTGCCTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (20-133)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	49.716	98.05	0.487
comM	Haemophilus influenzae Rd KW20	49.153	98.607	0.485
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	48.596	99.164	0.482
comM	Vibrio campbellii strain DS40M4	48.864	98.05	0.479
comM	Glaesserella parasuis strain SC1401	48.451	98.886	0.479
comM	Legionella pneumophila str. Paris	48.58	98.05	0.476
comM	Legionella pneumophila strain ERS1305867	48.58	98.05	0.476