Detailed information NTG0727608

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: N0U38_RS00655
• Genome accession: NZ_CP104107
• Coordinates: 145945..147432 (-)
• Length: 495 a.a.
• NCBI ID: WP_260270708.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain PH4
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 140945..152432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0U38_RS00630 (N0U38_00630)	-	141043..141327 (-)	285	WP_028688634.1	DUF6124 family protein	-
N0U38_RS00635 (N0U38_00635)	-	142024..142302 (+)	279	WP_260270706.1	HigA family addiction module antitoxin	-
N0U38_RS00640 (N0U38_00640)	-	142306..144093 (-)	1788	WP_062572405.1	monovalent cation:proton antiporter-2 (CPA2) family protein	-
N0U38_RS00645 (N0U38_00645)	-	144319..145335 (-)	1017	WP_260270707.1	alpha/beta hydrolase	-
N0U38_RS00650 (N0U38_00650)	-	145367..145618 (-)	252	WP_028688630.1	DUF2790 domain-containing protein	-
N0U38_RS00655 (N0U38_00655)	comM	145945..147432 (-)	1488	WP_260270708.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
N0U38_RS00660 (N0U38_00660)	-	147590..150103 (-)	2514	WP_036985631.1	TonB-dependent receptor	-
N0U38_RS00665 (N0U38_00665)	-	150185..151126 (-)	942	WP_260270709.1	FecR domain-containing protein	-
N0U38_RS00670 (N0U38_00670)	-	151123..151605 (-)	483	WP_028688626.1	sigma-70 family RNA polymerase sigma factor	-
N0U38_RS00675 (N0U38_00675)	-	151867..152226 (-)	360	WP_028688625.1	DUF2493 domain-containing protein	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 52825.59 Da
• Isoelectric Point: 8.3247

>NTDB_id=727608 N0U38_RS00655 WP_260270708.1 145945..147432(-) (comM) [Pseudomonas mosselii strain PH4]
MSLALVHSRAQVGVQAPAVSVETHLANGLPTLTLVGLPETTVKESKDRVRSAIVNSGLDYPARRITQSLAPADLPKDGGR
YDLAIALGILAANGQVPVATLDGIECLGELALSGALRPVQGVLPAALAARDAGRALVVPRENAEEASLASGLVVYAMGHL
RELVAHLNGQPALSPYAANGLLLEQRPYPDLSEVQGQIAAKRALLVAAAGAHNLLFTGPPGTGKTLLASRLPGLLPPLDE
REALEVAAIRSVSGHAPLDSWPQRPFRHPHHSASGPALVGGGSRPQPGEITLAHHGVLFLDELPEFERRVLEVLREPLES
GEIVVARAKDRVRFPARFQLVAAMNPCPCGYLGDPTGRCRCSSEQVQRYRNKLSGPLLDRIDLHLTVARESTVLTHQPSG
ETSASVGQRVAEARALQQRRQGCANAFLDLKGLRRHCPLEPVDQAWLEQACERLTLSLRAAHRLLKVARTLADLEGAQSI
ARAHLAEALQYRPGT

Nucleotide

• Length: 1488 bp

>NTDB_id=727608 N0U38_RS00655 WP_260270708.1 145945..147432(-) (comM) [Pseudomonas mosselii strain PH4]
ATGTCCCTCGCCCTCGTCCACAGCCGCGCCCAGGTGGGTGTGCAGGCCCCCGCCGTCAGCGTCGAAACCCACCTGGCCAA
CGGCCTGCCCACGCTTACCCTGGTCGGCCTGCCGGAAACCACGGTCAAGGAGAGCAAGGACCGGGTACGCAGCGCCATCG
TCAACTCCGGCCTGGACTACCCGGCCCGGCGCATCACCCAGAGCCTCGCCCCCGCCGACCTGCCCAAGGACGGTGGCCGC
TACGACCTGGCCATCGCCCTGGGCATCCTCGCCGCCAATGGCCAGGTGCCGGTGGCCACCCTCGACGGTATCGAATGCCT
GGGTGAGCTGGCCCTGTCGGGCGCCTTGCGCCCGGTACAGGGCGTGCTGCCTGCGGCATTGGCGGCCCGGGATGCGGGTC
GGGCGCTGGTGGTGCCACGGGAGAATGCCGAGGAGGCCAGCCTGGCCAGCGGCCTGGTGGTGTATGCGATGGGGCACCTG
CGCGAGCTGGTGGCCCACCTGAACGGCCAGCCCGCGCTGTCTCCCTACGCGGCCAATGGCCTGCTGCTGGAGCAACGCCC
CTATCCGGACCTCAGCGAAGTCCAGGGCCAGATCGCGGCCAAGCGCGCCCTGCTGGTAGCCGCGGCCGGTGCGCACAACC
TGTTGTTCACAGGTCCCCCGGGCACTGGCAAGACCTTGCTTGCCAGTCGTCTGCCCGGGCTGCTGCCGCCGCTGGACGAG
CGCGAGGCACTGGAGGTGGCGGCGATCCGCTCGGTCAGCGGCCACGCCCCGCTCGATAGCTGGCCACAGCGGCCGTTCCG
CCATCCGCACCATTCGGCCTCAGGCCCGGCGCTGGTCGGCGGCGGCAGCCGGCCGCAACCCGGCGAGATCACCCTGGCGC
ACCATGGCGTGCTGTTTCTCGACGAGCTGCCCGAGTTCGAACGGCGCGTGCTGGAGGTGCTGCGCGAACCGCTGGAGTCC
GGCGAGATCGTGGTGGCCCGGGCCAAGGACCGGGTGCGCTTCCCGGCGCGCTTCCAGCTGGTGGCGGCCATGAACCCCTG
CCCCTGTGGCTACCTGGGCGACCCCACCGGCCGCTGCCGGTGCAGCAGCGAGCAGGTCCAGCGCTACCGCAACAAGCTGT
CCGGCCCGCTGCTCGACCGTATCGACCTGCACCTGACGGTAGCCCGGGAAAGTACCGTACTGACCCACCAGCCCAGTGGC
GAGACCAGCGCCAGCGTTGGCCAGAGAGTGGCCGAGGCACGGGCGCTGCAGCAGCGCCGGCAGGGCTGCGCCAACGCCTT
CCTCGACCTCAAGGGGCTGCGTCGGCATTGCCCGCTGGAGCCGGTTGACCAGGCCTGGCTGGAGCAGGCCTGCGAACGGC
TGACACTGTCGTTGCGGGCGGCGCACCGGCTGCTGAAGGTCGCCCGCACGCTGGCGGACCTGGAGGGCGCGCAATCCATC
GCCCGGGCGCACCTGGCGGAAGCGTTGCAGTACCGACCCGGCACTTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	54.89	100	0.556
comM	Glaesserella parasuis strain SC1401	54.491	100	0.552
comM	Vibrio campbellii strain DS40M4	54.949	100	0.549
comM	Vibrio cholerae strain A1552	54.545	100	0.545
comM	Legionella pneumophila str. Paris	48.387	100	0.485
comM	Legionella pneumophila strain ERS1305867	48.387	100	0.485
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	47.211	100	0.479