Detailed information NTG0726334

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: P1T45_RS00350
• Genome accession: NZ_CP119427
• Coordinates: 54486..55403 (+)
• Length: 305 a.a.
• NCBI ID: WP_003107457.1
• Uniprot ID: A0ABP2SVA0
• Organism: Streptococcus parauberis strain KSP45
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 49486..60403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P1T45_RS00330 (P1T45_00330)	purD	50037..51299 (+)	1263	WP_003108972.1	phosphoribosylamine--glycine ligase	-
P1T45_RS00335 (P1T45_00335)	purE	51507..51995 (+)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
P1T45_RS00340 (P1T45_00340)	purK	51982..53067 (+)	1086	WP_003108971.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
P1T45_RS00345 (P1T45_00345)	purB	53077..54369 (+)	1293	WP_003108970.1	adenylosuccinate lyase	-
P1T45_RS00350 (P1T45_00350)	comR	54486..55403 (+)	918	WP_003107457.1	helix-turn-helix transcriptional regulator	Regulator
P1T45_RS00355 (P1T45_00355)	-	55469..55567 (+)	99	WP_199764314.1	quorum-sensing system DWW-type pheromone	-
P1T45_RS00360 (P1T45_00360)	ruvB	55702..56700 (+)	999	WP_003105437.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
P1T45_RS00365 (P1T45_00365)	-	56924..57352 (+)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
P1T45_RS00370 (P1T45_00370)	-	57381..57782 (+)	402	WP_003105881.1	membrane protein	-
P1T45_RS00375 (P1T45_00375)	-	57779..59557 (+)	1779	WP_003107454.1	acyltransferase family protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35766.83 Da
• Isoelectric Point: 9.0707

>NTDB_id=726334 P1T45_RS00350 WP_003107457.1 54486..55403(+) (comR) [Streptococcus parauberis strain KSP45]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFEVIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=726334 P1T45_RS00350 WP_003107457.1 54486..55403(+) (comR) [Streptococcus parauberis strain KSP45]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAAGTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364