Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NX062_RS06215 Genome accession   NZ_CP103328
Coordinates   1204763..1205914 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain KC14-1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1199763..1210914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX062_RS06180 (NX062_06180) yjbB 1200434..1201651 (+) 1218 WP_080478438.1 MFS transporter -
  NX062_RS06185 (NX062_06185) yjbC 1201816..1202394 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  NX062_RS06190 (NX062_06190) spx 1202575..1202970 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NX062_RS06195 (NX062_06195) yjbE 1203013..1203669 (-) 657 WP_003232944.1 TerC family protein -
  NX062_RS06200 (NX062_06200) - 1203839..1203979 (+) 141 WP_119122854.1 hypothetical protein -
  NX062_RS06205 (NX062_06205) mecA 1203946..1204602 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  NX062_RS06210 (NX062_06210) - 1204597..1204719 (-) 123 WP_003245684.1 hypothetical protein -
  NX062_RS06215 (NX062_06215) coiA 1204763..1205914 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  NX062_RS06220 (NX062_06220) pepF 1206144..1207973 (+) 1830 WP_206734712.1 oligoendopeptidase F -
  NX062_RS06225 (NX062_06225) - 1208011..1208178 (-) 168 WP_003244944.1 hypothetical protein -
  NX062_RS06230 (NX062_06230) spxH 1208493..1209392 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NX062_RS06235 (NX062_06235) bhbI 1209389..1209787 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NX062_RS06240 (NX062_06240) cwlQ 1210042..1210776 (-) 735 WP_250621098.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=721968 NX062_RS06215 WP_046380934.1 1204763..1205914(+) (coiA) [Bacillus subtilis strain KC14-1]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=721968 NX062_RS06215 WP_046380934.1 1204763..1205914(+) (coiA) [Bacillus subtilis strain KC14-1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963