Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NW961_RS13015 Genome accession   NZ_CP102955
Coordinates   2645893..2646558 (-) Length   221 a.a.
NCBI ID   WP_258415690.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 28-G-I     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2640893..2651558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW961_RS12995 (NW961_12995) - 2641363..2641476 (-) 114 WP_072384844.1 hypothetical protein -
  NW961_RS13000 (NW961_13000) - 2642135..2644135 (-) 2001 WP_258411888.1 ABC transporter permease -
  NW961_RS13005 (NW961_13005) - 2644132..2644887 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  NW961_RS13010 (NW961_13010) braS 2644995..2645882 (-) 888 WP_000143419.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NW961_RS13015 (NW961_13015) braR 2645893..2646558 (-) 666 WP_258415690.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NW961_RS13020 (NW961_13020) - 2646584..2646784 (-) 201 WP_000604727.1 hypothetical protein -
  NW961_RS13025 (NW961_13025) - 2646982..2648406 (+) 1425 WP_000953743.1 alkaline phosphatase -
  NW961_RS13505 - 2648466..2648567 (-) 102 WP_000731976.1 SE2200 family small protein -
  NW961_RS13035 (NW961_13035) - 2648689..2649144 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NW961_RS13040 (NW961_13040) - 2649389..2650150 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25410.48 Da        Isoelectric Point: 4.6846

>NTDB_id=720356 NW961_RS13015 WP_258415690.1 2645893..2646558(-) (braR) [Staphylococcus aureus strain 28-G-I]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQMLK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=720356 NW961_RS13015 WP_258415690.1 2645893..2646558(-) (braR) [Staphylococcus aureus strain 28-G-I]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CACTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATGTTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991