Detailed information NTG0719799

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NVB75_RS19055
• Genome accession: NZ_CP102929
• Coordinates: 4136323..4137819 (+)
• Length: 498 a.a.
• NCBI ID: WP_093203748.1
• Uniprot ID: -
• Organism: Pseudomonas sp. CBS
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4131323..4142819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NVB75_RS19030 (NVB75_19030)	-	4131525..4132862 (-)	1338	WP_258342798.1	ammonium transporter	-
NVB75_RS19035 (NVB75_19035)	glnK	4132897..4133235 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
NVB75_RS19040 (NVB75_19040)	-	4133657..4133917 (+)	261	WP_003208783.1	accessory factor UbiK family protein	-
NVB75_RS19045 (NVB75_19045)	cfa	4133970..4135082 (-)	1113	WP_093203756.1	cyclopropane fatty acyl phospholipid synthase	-
NVB75_RS19050 (NVB75_19050)	-	4135317..4136225 (+)	909	WP_258342800.1	LysR family transcriptional regulator	-
NVB75_RS19055 (NVB75_19055)	comM	4136323..4137819 (+)	1497	WP_093203748.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NVB75_RS19060 (NVB75_19060)	-	4137806..4138390 (-)	585	WP_258342801.1	TetR/AcrR family transcriptional regulator	-
NVB75_RS19065 (NVB75_19065)	-	4138505..4139428 (+)	924	WP_258342802.1	ABC transporter six-transmembrane domain-containing protein	-
NVB75_RS19070 (NVB75_19070)	-	4139546..4141522 (-)	1977	WP_258342803.1	methyl-accepting chemotaxis protein	-
NVB75_RS19075 (NVB75_19075)	-	4141701..4142621 (-)	921	WP_258342804.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53086.29 Da
• Isoelectric Point: 8.4270

>NTDB_id=719799 NVB75_RS19055 WP_093203748.1 4136323..4137819(+) (comM) [Pseudomonas sp. CBS]
MSLAIVHSRAQIGVEAPAVTVEVHMANGLPSLTLVGLPETAVKESKDRVRSAILNSALQYPSRRITLNLAPADLPKDGGR
FDLAIALGILAASVQVPALTLDNVECLGELALSGEVRAVKGVLPAALAARKAGRTLIVPRANAEEACLASGLKVIAVDHL
LQVVAHLNGHVPIEPFVSSGLMYLNKPYPDLSEVQGQLAAKRALLIAAAGAHNLLLSGPPGTGKTLLASRLPGLLPPLSE
QEALEVAAIQSVVSLAPLSHWPHRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVIARARDRVSFPARFQLVAAMNPCPCGYVGEPSGRCRCTPEQIQRYRNKLSGPLLDRIDLHVTVARESTALNPGKQS
GDDTASASALVAEARERQQRRQGCANAFLDLPGLRQHCKLAKADEGWLESACERLTLSLRAAHRLLKVARTLADLEQVEA
IARHHLAEALQYRPASAS

Nucleotide

• Length: 1497 bp

>NTDB_id=719799 NVB75_RS19055 WP_093203748.1 4136323..4137819(+) (comM) [Pseudomonas sp. CBS]
ATGTCCCTCGCCATCGTCCACAGCCGCGCCCAGATTGGCGTTGAAGCCCCCGCCGTCACTGTCGAGGTGCACATGGCCAA
CGGCTTGCCTTCGCTGACGCTGGTAGGCCTGCCGGAAACCGCCGTCAAGGAAAGCAAAGACCGCGTGCGCAGTGCCATTC
TCAATTCTGCGCTGCAATACCCTTCCCGCCGCATCACCCTCAACCTCGCGCCCGCCGACTTGCCCAAGGACGGTGGGCGT
TTTGATTTGGCGATTGCCCTGGGGATTCTCGCCGCCAGTGTGCAGGTACCGGCGCTGACCCTCGATAACGTGGAATGCCT
GGGAGAGCTTGCACTGTCAGGCGAGGTGCGGGCGGTAAAAGGGGTATTGCCAGCAGCGCTGGCGGCGCGCAAGGCCGGGC
GCACCTTGATAGTGCCTCGGGCCAATGCGGAAGAGGCGTGCCTGGCCTCGGGATTGAAGGTGATTGCGGTGGATCATCTG
CTGCAAGTGGTGGCGCACCTGAACGGTCACGTGCCGATCGAACCCTTCGTTTCCAGTGGCCTGATGTACTTGAACAAACC
CTATCCCGACCTCAGTGAAGTGCAGGGCCAACTGGCAGCCAAACGCGCACTGCTGATTGCCGCCGCGGGCGCCCACAACC
TGTTGCTCAGCGGGCCACCGGGCACCGGCAAGACCTTGCTCGCCAGCCGTCTGCCGGGGCTGTTGCCGCCCTTGAGTGAA
CAGGAAGCGCTGGAGGTGGCGGCGATTCAATCAGTGGTCAGCCTGGCGCCGCTGAGCCATTGGCCGCACCGGCCGTTTCG
CCAGCCGCACCACTCGGCGTCAGGCCCGGCGCTGGTAGGCGGCGGCTCGAAACCGCAGCCGGGGGAAATCACCCTCGCCC
ATCATGGTGTGTTGTTTCTCGACGAACTGCCGGAGTTTGATCGCAAGGTCCTGGAGGTGCTGCGTGAGCCGTTGGAGTCC
GGGCATATTGTGATTGCCCGCGCCCGCGACCGGGTGAGTTTCCCGGCGCGTTTCCAGTTGGTGGCGGCGATGAATCCCTG
CCCTTGCGGCTATGTGGGCGAGCCAAGTGGGCGCTGTCGCTGCACGCCGGAGCAGATCCAGCGCTATCGCAACAAGCTCT
CGGGGCCGCTGCTGGACCGGATCGACCTGCACGTGACCGTCGCCCGGGAAAGCACTGCGCTGAACCCGGGCAAACAGTCA
GGCGACGATACCGCCAGCGCATCCGCCCTCGTGGCCGAGGCCCGGGAGCGTCAGCAACGGCGCCAGGGCTGCGCCAATGC
CTTTCTCGACCTGCCGGGGCTACGCCAGCACTGCAAGCTGGCGAAGGCCGATGAAGGCTGGCTGGAGAGTGCGTGCGAAC
GCCTGACACTGTCGCTGCGGGCGGCGCATCGTTTGCTCAAGGTCGCCCGCACCCTGGCCGACCTGGAACAGGTGGAAGCC
ATAGCCCGCCATCATCTGGCGGAAGCCTTGCAGTACCGCCCCGCTAGCGCGTCCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	56.97	99.398	0.566
comM	Glaesserella parasuis strain SC1401	55.489	100	0.558
comM	Vibrio campbellii strain DS40M4	55.758	99.398	0.554
comM	Haemophilus influenzae Rd KW20	54.691	100	0.55
comM	Legionella pneumophila str. Paris	51.21	99.598	0.51
comM	Legionella pneumophila strain ERS1305867	51.21	99.598	0.51
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.322	100	0.468