Detailed information NTG0071955

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JG732_RS21725
• Genome accession: NZ_AP024205
• Coordinates: 4498934..4499959 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain TA8571
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4493934..4504959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JG732_RS21705 (ECTA8571_42480)	metJ	4494995..4495312 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JG732_RS21710 (ECTA8571_42490)	yiiX	4495496..4496104 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
JG732_RS21715 (ECTA8571_42500)	rpmE	4496165..4496377 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JG732_RS21720 (ECTA8571_42510)	priA	4496580..4498778 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
JG732_RS21725 (ECTA8571_42520)	cytR	4498934..4499959 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JG732_RS21730 (ECTA8571_42530)	ftsN	4500051..4501010 (+)	960	WP_000068828.1	cell division protein FtsN	-
JG732_RS21735 (ECTA8571_42540)	hslV	4501103..4501633 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JG732_RS21740 (ECTA8571_42550)	hslU	4501643..4502974 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
JG732_RS21745 (ECTA8571_42560)	menA	4503041..4503967 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JG732_RS21750 (ECTA8571_42570)	rraA	4504060..4504545 (+)	486	WP_063084769.1	ribonuclease E activity regulator RraA	-
JG732_RS21755 (ECTA8571_42580)	zapB	4504630..4504875 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=71955 JG732_RS21725 WP_000644904.1 4498934..4499959(+) (cytR) [Escherichia coli strain TA8571]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=71955 JG732_RS21725 WP_000644904.1 4498934..4499959(+) (cytR) [Escherichia coli strain TA8571]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628