NTDB

Overview

Name	pilE	Type	Machinery gene
Locus tag	NU955_RS16440	Genome accession	NZ_CP102762
Coordinates	3456440..3456901 (-)	Length	153 a.a.
NCBI ID	WP_002062166.1	Uniprot ID	A0A9E9MD50
Organism	Acinetobacter baumannii strain AOR07-BL
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3451440..3461901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NU955_RS16415	-	3451801..3452184 (+)	384	WP_000090000.1	RidA family protein	-
NU955_RS16420	-	3452394..3452588 (+)	195	WP_000289091.1	bacterioferritin-associated ferredoxin	-
NU955_RS16425	bfr	3452833..3453297 (+)	465	WP_000678123.1	heteropolymeric bacterioferritin subunit Bfr	-
NU955_RS16430	-	3453338..3454966 (-)	1629	WP_002062192.1	PglL family O-oligosaccharyltransferase	-
NU955_RS16435	-	3455073..3456383 (-)	1311	WP_002062173.1	O-antigen ligase family protein	-
NU955_RS16440	pilE	3456440..3456901 (-)	462	WP_002062166.1	pilin	Machinery gene
NU955_RS16445	-	3457246..3457806 (-)	561	WP_000258951.1	TPM domain-containing protein	-
NU955_RS16450	-	3457800..3458882 (-)	1083	WP_002062201.1	TPM domain-containing protein	-
NU955_RS16455	-	3458904..3459494 (-)	591	WP_000846931.1	LemA family protein	-
NU955_RS16460	-	3459625..3460512 (-)	888	WP_030423574.1	metal-dependent hydrolase	-

Sequence

Protein

Download Length: 153 a.a. Molecular weight: 15655.83 Da Isoelectric Point: 7.5868

                                >NTDB_id=718869 NU955_RS16440 WP_002062166.1 3456440..3456901(-) (pilE) [Acinetobacter baumannii strain AOR07-BL]

MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIARSQVSEAMELASGLKGAVAETFSQDATCPTNGTNGIATATDINGK

YVASVTTAGNATASGGCTITAKMRATGVSKGIQNGELILTLSNADKGSNVWSCTSTGPNKIEQKYLPKSCTSS

Nucleotide

Download Length: 462 bp

                                >NTDB_id=718869 NU955_RS16440 WP_002062166.1 3456440..3456901(-) (pilE) [Acinetobacter baumannii strain AOR07-BL]

ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT

TCCTGCGTATCAAGACTATATCGCTCGTTCTCAAGTTAGTGAAGCTATGGAGTTAGCTAGTGGATTGAAGGGAGCTGTTG

CAGAGACTTTTAGTCAAGATGCTACTTGCCCAACAAATGGTACTAATGGAATTGCTACTGCTACTGATATTAATGGTAAA

TATGTTGCTTCTGTAACCACGGCAGGTAACGCTACTGCCTCAGGTGGATGTACAATTACTGCAAAAATGCGGGCAACTGG

AGTTTCAAAAGGTATTCAAAATGGAGAGCTTATTCTAACTCTTAGTAATGCAGATAAAGGTTCAAATGTGTGGAGTTGTA

CTTCAACTGGTCCAAACAAAATTGAACAAAAGTACTTACCTAAATCATGTACTTCTTCATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)

Pilin (bacterial filament) (Pilin)

(35-151)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
pilE	Neisseria gonorrhoeae strain FA1090	47.826	100	0.503
pilE	Neisseria gonorrhoeae MS11	43.21	100	0.458
pilA2	Legionella pneumophila strain ERS1305867	43.046	98.693	0.425
pilA2	Legionella pneumophila str. Paris	43.046	98.693	0.425
pilA	Ralstonia pseudosolanacearum GMI1000	39.752	100	0.418
pilA	Acinetobacter nosocomialis M2	51.2	81.699	0.418
comP	Acinetobacter baylyi ADP1	42.384	98.693	0.418
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.105	99.346	0.418
pilA	Acinetobacter baumannii strain A118	39.873	100	0.412
pilA	Pseudomonas aeruginosa PAK	38.462	100	0.392
pilA/pilA1	Eikenella corrodens VA1	37.58	100	0.386
pilA	Vibrio parahaemolyticus RIMD 2210633	41.727	90.85	0.379
pilA	Haemophilus influenzae Rd KW20	40.58	90.196	0.366
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.086	98.693	0.366

Detailed information NTG0718869