Detailed information NTG0718149

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NT239_RS09395
• Genome accession: NZ_CP102611
• Coordinates: 1998137..1999648 (+)
• Length: 503 a.a.
• NCBI ID: WP_373973871.1
• Uniprot ID: -
• Organism: Chitinibacter sp. SCUT-21
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1993137..2004648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NT239_RS09365 (NT239_09365)	-	1993316..1994506 (+)	1191	WP_373973865.1	acetate/propionate family kinase	-
NT239_RS09370 (NT239_09370)	-	1994679..1995431 (+)	753	WP_373973866.1	BPSS1780 family membrane protein	-
NT239_RS09375 (NT239_09375)	-	1995428..1995799 (+)	372	WP_373973867.1	diacylglycerol kinase	-
NT239_RS09380 (NT239_09380)	-	1995899..1996309 (-)	411	WP_373973868.1	DUF2721 domain-containing protein	-
NT239_RS09385 (NT239_09385)	-	1996299..1997072 (-)	774	WP_373973869.1	LytR/AlgR family response regulator transcription factor	-
NT239_RS09390 (NT239_09390)	-	1997041..1998069 (-)	1029	WP_373973870.1	sensor histidine kinase	-
NT239_RS09395 (NT239_09395)	comM	1998137..1999648 (+)	1512	WP_373973871.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NT239_RS09400 (NT239_09400)	-	1999645..2001696 (-)	2052	WP_373973872.1	putative bifunctional diguanylate cyclase/phosphodiesterase	-
NT239_RS09405 (NT239_09405)	-	2001693..2002607 (-)	915	WP_373973873.1	EAL and HDOD domain-containing protein	-
NT239_RS09410 (NT239_09410)	-	2002765..2003691 (-)	927	WP_373973874.1	LysR substrate-binding domain-containing protein	-
NT239_RS09415 (NT239_09415)	yfcF	2003794..2004423 (+)	630	WP_373973875.1	glutathione transferase	-

Sequence

Protein

• Length: 503 a.a.
• Molecular weight: 54301.96 Da
• Isoelectric Point: 7.8335

>NTDB_id=718149 NT239_RS09395 WP_373973871.1 1998137..1999648(+) (comM) [Chitinibacter sp. SCUT-21]
MSLAVVYSRALDGMQAQQVCVEVHLANGLPAFNLVGLADTEVRESRERVRAAIQVAGFEFPSRRITVNLAPADLPKGAGH
YDLAIAIGILAASEQIPSEHLAEYEFAGELGLTGQLRAVRGALALALAARHAGRALVISACSSTEAALIKEATVLAAEHL
LQVCQHFSSQQTDSLHAAQPPVHQSAPIYPDLADVKGQLAARRALEIAAAGGHSILLIGPPGTGKSMLAQRFPGLLPPLS
EHEALEAATIQSLGAKGLDPHRFGQRPFRSPHHTASSVALVGGGSVPQPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGKIHISRAAQQAEFPAQFQLIAAMNPCPCGYLGHGKKACRCTPEQIARYRGKISGPLLDRIDMVVEVGALSDEALLNR
TQGESSQHVRQRVAQARAKQMKRQAQHNAKLHSQTLDTHCQPDQEGLELLQKAVNQLAWSARAYHRVLRVARTIADLANS
EQIHRQHIAEAIQYRRGIESHSH

Nucleotide

• Length: 1512 bp

>NTDB_id=718149 NT239_RS09395 WP_373973871.1 1998137..1999648(+) (comM) [Chitinibacter sp. SCUT-21]
ATGTCATTAGCGGTGGTGTATTCGCGTGCTTTAGACGGTATGCAAGCACAGCAGGTTTGCGTCGAAGTCCATTTAGCCAA
TGGTTTACCCGCGTTTAATTTAGTCGGATTGGCCGATACTGAGGTTCGCGAATCCCGCGAACGAGTGCGGGCGGCCATTC
AAGTGGCCGGTTTTGAATTTCCATCCCGCCGCATCACTGTTAATCTCGCCCCCGCAGATTTACCGAAAGGCGCAGGGCAT
TATGATTTGGCGATTGCGATCGGTATTTTAGCCGCAAGTGAGCAAATCCCGAGTGAGCACTTGGCCGAGTATGAGTTTGC
AGGTGAACTAGGTCTCACTGGTCAACTTCGGGCTGTTCGCGGAGCATTGGCGCTGGCTTTGGCGGCGCGTCATGCTGGTC
GAGCTTTAGTCATCAGTGCATGTAGCAGTACGGAAGCCGCCTTGATTAAAGAGGCCACGGTATTGGCCGCAGAGCACTTG
CTGCAGGTTTGTCAGCATTTTAGCTCCCAGCAAACCGACTCACTGCATGCGGCGCAGCCACCCGTACACCAATCCGCCCC
CATCTATCCCGATCTTGCCGATGTCAAAGGGCAACTCGCTGCACGCCGCGCCCTCGAAATTGCCGCGGCCGGAGGTCATT
CGATCTTACTGATCGGGCCGCCAGGCACCGGTAAATCTATGCTGGCTCAAAGATTCCCTGGTCTGCTACCGCCTTTAAGC
GAACATGAAGCATTAGAAGCAGCGACAATCCAATCTCTGGGGGCTAAAGGTTTAGACCCTCACCGCTTTGGGCAAAGGCC
ATTTCGCTCACCTCATCACACCGCATCCAGTGTTGCCCTAGTGGGCGGCGGCAGTGTGCCTCAGCCTGGAGAAATCTCGT
TGGCTCACCACGGGGTGTTGTTTCTGGATGAGCTCCCTGAGTTTGACCGCAAAGTACTGGAGGTGCTGCGCGAGCCCTTA
GAAAACGGCAAGATTCATATTTCTCGCGCGGCGCAGCAAGCCGAATTTCCAGCGCAATTTCAATTGATCGCGGCAATGAA
TCCATGTCCATGCGGTTATTTGGGGCACGGCAAGAAAGCCTGCCGTTGTACACCCGAACAGATCGCACGTTATCGCGGCA
AAATTTCTGGCCCCTTGCTGGATCGAATTGATATGGTGGTTGAAGTGGGAGCTCTCTCCGATGAAGCGCTCCTAAACCGT
ACACAGGGTGAGAGCAGCCAGCATGTACGACAACGTGTTGCTCAGGCCAGAGCCAAACAAATGAAGCGCCAAGCTCAGCA
CAATGCCAAGCTACATAGCCAAACGCTAGATACTCATTGCCAACCCGATCAAGAAGGGCTGGAGTTGCTCCAAAAAGCAG
TCAATCAACTCGCTTGGTCTGCGCGGGCGTATCACCGTGTTCTACGTGTAGCCCGAACCATCGCGGATTTAGCGAACAGC
GAGCAAATTCATCGCCAGCATATTGCCGAAGCCATCCAATATAGACGTGGCATCGAATCACACAGTCATTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-395)

• Subunit ChlI of Mg-chelatase (ChlI) (21-138)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-495)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Legionella pneumophila str. Paris	51.866	100	0.525
comM	Legionella pneumophila strain ERS1305867	51.866	100	0.525
comM	Vibrio cholerae strain A1552	52.621	98.608	0.519
comM	Vibrio campbellii strain DS40M4	51.71	98.807	0.511
comM	Haemophilus influenzae Rd KW20	51.098	99.602	0.509
comM	Glaesserella parasuis strain SC1401	49.701	99.602	0.495
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.328	100	0.453