Detailed information NTG0716375

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NRF13_RS18190
• Genome accession: NZ_CP102350
• Coordinates: 3618458..3619603 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain PMC206
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3613458..3624603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NRF13_RS18170 (NRF13_18170)	-	3613932..3614648 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
NRF13_RS18175 (NRF13_18175)	narK	3614746..3615936 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
NRF13_RS18180 (NRF13_18180)	argS	3616071..3617741 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
NRF13_RS18185 (NRF13_18185)	-	3617738..3618166 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
NRF13_RS18190 (NRF13_18190)	rapF	3618458..3619603 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
NRF13_RS18195 (NRF13_18195)	-	3619587..3619706 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
NRF13_RS18200 (NRF13_18200)	speB	3619829..3620701 (-)	873	WP_058906421.1	agmatinase	-
NRF13_RS18205 (NRF13_18205)	speE	3620761..3621591 (-)	831	WP_003151052.1	spermidine synthase	-
NRF13_RS18210 (NRF13_18210)	-	3621791..3623863 (+)	2073	WP_058906422.1	transglycosylase domain-containing protein	-
NRF13_RS18215 (NRF13_18215)	-	3623887..3624318 (-)	432	WP_043867516.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=716375 NRF13_RS18190 WP_017418708.1 3618458..3619603(+) (rapF) [Bacillus velezensis strain PMC206]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=716375 NRF13_RS18190 WP_017418708.1 3618458..3619603(+) (rapF) [Bacillus velezensis strain PMC206]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533