Detailed information NTG0715448

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PQP10_RS13510
• Genome accession: NZ_CP116976
• Coordinates: 2800782..2801807 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUVM53
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2795782..2806807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQP10_RS13485 (PQP10_13485)	metJ	2796219..2796536 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PQP10_RS13490 (PQP10_13490)	yiiX	2796720..2797328 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PQP10_RS13495 (PQP10_13495)	-	2797335..2797958 (+)	624	WP_000720774.1	TIGR02117 family protein	-
PQP10_RS13500 (PQP10_13500)	rpmE	2798013..2798225 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PQP10_RS13505 (PQP10_13505)	priA	2798428..2800626 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PQP10_RS13510 (PQP10_13510)	cytR	2800782..2801807 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PQP10_RS13515 (PQP10_13515)	ftsN	2801899..2802858 (+)	960	WP_000068828.1	cell division protein FtsN	-
PQP10_RS13520 (PQP10_13520)	hslV	2802951..2803481 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PQP10_RS13525 (PQP10_13525)	hslU	2803491..2804822 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PQP10_RS13530 (PQP10_13530)	menA	2804889..2805815 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PQP10_RS13535 (PQP10_13535)	rraA	2805908..2806393 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PQP10_RS13540 (PQP10_13540)	zapB	2806478..2806723 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=715448 PQP10_RS13510 WP_000644904.1 2800782..2801807(+) (cytR) [Escherichia coli strain CUVM53]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=715448 PQP10_RS13510 WP_000644904.1 2800782..2801807(+) (cytR) [Escherichia coli strain CUVM53]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628