Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   NQZ90_RS02005 Genome accession   NZ_CP102148
Coordinates   404863..406857 (+) Length   664 a.a.
NCBI ID   WP_141591425.1    Uniprot ID   A0AAW9DHU2
Organism   Streptococcus suis strain DNC15     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 399863..411857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS01990 (NQZ90_01990) fmt 401850..402788 (+) 939 WP_141591423.1 methionyl-tRNA formyltransferase -
  NQZ90_RS01995 (NQZ90_01995) rsmB 402775..404088 (+) 1314 WP_074391005.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  NQZ90_RS02000 (NQZ90_02000) - 404126..404863 (+) 738 WP_004194145.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  NQZ90_RS02005 (NQZ90_02005) stkP 404863..406857 (+) 1995 WP_141591425.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  NQZ90_RS02010 (NQZ90_02010) liaF 407146..407841 (+) 696 WP_024384079.1 cell wall-active antibiotics response protein LiaF -
  NQZ90_RS02015 (NQZ90_02015) - 407838..408854 (+) 1017 WP_002937028.1 sensor histidine kinase -
  NQZ90_RS02020 (NQZ90_02020) - 408826..409467 (+) 642 WP_002937025.1 response regulator transcription factor -
  NQZ90_RS02025 (NQZ90_02025) - 409517..410917 (+) 1401 WP_029173958.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  NQZ90_RS02030 (NQZ90_02030) - 410919..411290 (+) 372 WP_002937017.1 S1 RNA-binding domain-containing protein -

Sequence


Protein


Download         Length: 664 a.a.        Molecular weight: 71403.95 Da        Isoelectric Point: 6.3011

>NTDB_id=714993 NQZ90_RS02005 WP_141591425.1 404863..406857(+) (stkP) [Streptococcus suis strain DNC15]
MIQIGKIFAGRYRIVRQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDQIAIQRFQREARAMAELDHPNIVRISDIG
EEDGQQYLAMEYVNGLDLKRYIKENAPLSNDVAVRIMGQILLAMRMAHTRGIVHRDLKPQNVLLTSNGVAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIILFEMLTGRIPYDGDSAVTIALQHFQKPLPSVREENANVP
QALENVVLKATAKKLNERYKSVAEMYADLASALSMDRRNEPRVELEGNKVDTKTLPKLSQANVETKVPHTNSSAQTSATD
KGSGKKEVAKSGNKPVSKLRSGMRTRYKVLIGAILLTVIAAGLIFFNTPRTVTVPDVSGQTVEKATEMIEVAGLEVGNIT
EEATATVDEGLVIRTSPAAKTTRRQGSKIDIVVAMAAMVSIPDVTDKDSDTARQELEALGFQVTIKEEYSEKVAQGLVIK
TDPGANSSAEKGAKITLYVSKGVAPQVVPNVVGKTQENATQILQTAGFSIGTITQEYSSSVTAGQVISTDPVANTELTKG
SIINLVVSKGKELIMPDLTSGNYTYSQARSQLQALGVNVESIEKQEDRSYYSTTSDIVIGQYPAAGATIDGTVTLYVSVA
STGTSSDSSTGSSTSTSTSTDSGQ

Nucleotide


Download         Length: 1995 bp        

>NTDB_id=714993 NQZ90_RS02005 WP_141591425.1 404863..406857(+) (stkP) [Streptococcus suis strain DNC15]
ATGATTCAAATCGGTAAGATCTTTGCCGGTCGGTATCGAATCGTTCGGCAAATTGGTCGAGGCGGTATGGCAGATGTTTA
CCTAGCAAGAGATTTGATTTTAGATGGAGAAGAGGTTGCTGTTAAAGTTCTTCGGACCAACTATCAGACAGATCAAATTG
CTATCCAGCGTTTTCAACGTGAAGCGCGTGCCATGGCAGAACTTGACCATCCCAATATCGTTCGTATTTCGGACATCGGC
GAAGAAGATGGTCAACAGTATCTGGCTATGGAATATGTCAATGGCCTCGATTTAAAACGTTATATAAAAGAAAATGCACC
ACTCTCCAACGATGTTGCGGTGCGAATTATGGGACAGATTCTCCTTGCTATGCGAATGGCGCACACGAGAGGAATTGTCC
ATCGAGATTTGAAACCTCAGAACGTCCTTTTGACTTCCAATGGAGTCGCTAAAGTAACAGACTTTGGTATTGCAGTTGCC
TTTGCTGAAACGAGTTTGACACAAACCAACTCCATGTTGGGTTCTGTTCACTATCTTTCACCTGAGCAGGCGCGTGGTTC
GAAAGCTACCATTCAAAGTGACATTTATGCGATGGGAATCATCCTTTTTGAAATGTTGACGGGTCGCATTCCCTATGATG
GAGACAGTGCTGTGACGATCGCTCTTCAGCATTTCCAAAAACCTCTCCCATCTGTTAGAGAAGAGAATGCCAACGTACCT
CAGGCTTTAGAAAATGTTGTACTAAAAGCAACGGCTAAAAAATTAAACGAGCGCTATAAGTCGGTTGCAGAAATGTATGC
AGATTTAGCTTCGGCTCTATCCATGGATCGTCGGAATGAACCCAGGGTTGAACTAGAAGGGAACAAGGTTGATACAAAAA
CCTTGCCGAAACTCTCCCAGGCCAATGTTGAAACGAAAGTACCGCATACAAACAGTTCTGCCCAAACTTCTGCGACGGAT
AAGGGGTCTGGTAAGAAAGAAGTGGCGAAGTCGGGAAATAAGCCTGTTTCAAAACTAAGGTCAGGTATGCGTACACGCTA
CAAAGTCTTGATAGGGGCTATTTTGTTAACAGTCATAGCGGCTGGACTCATATTTTTCAACACTCCACGAACAGTTACCG
TTCCTGATGTATCTGGTCAAACCGTTGAAAAAGCTACAGAAATGATTGAAGTGGCAGGATTGGAAGTTGGAAACATCACA
GAAGAAGCGACAGCGACTGTAGATGAAGGCTTGGTAATACGGACCTCTCCGGCTGCAAAGACGACCAGACGTCAAGGAAG
TAAGATTGATATTGTAGTAGCAATGGCTGCGATGGTATCTATTCCAGATGTGACAGATAAGGATTCTGACACTGCACGGC
AGGAATTGGAGGCTCTTGGTTTCCAAGTGACAATAAAAGAAGAATATAGCGAAAAAGTTGCCCAAGGTCTCGTTATCAAA
ACAGATCCAGGAGCAAATAGTTCTGCTGAGAAGGGGGCGAAAATTACCCTTTACGTTTCCAAAGGAGTAGCGCCACAAGT
TGTTCCAAACGTTGTTGGAAAAACTCAGGAGAATGCTACTCAAATTCTTCAGACAGCAGGCTTCAGTATTGGAACTATTA
CTCAGGAATATAGCTCATCTGTTACTGCGGGTCAGGTTATCAGTACAGATCCTGTTGCCAATACAGAGTTGACAAAAGGT
TCTATCATCAATCTAGTTGTTTCAAAAGGAAAAGAATTGATTATGCCTGATTTGACATCTGGCAATTACACCTATTCACA
GGCACGTAGTCAATTACAAGCACTGGGTGTCAATGTGGAAAGTATTGAAAAACAAGAAGATAGAAGCTATTATTCAACGA
CAAGTGACATCGTCATTGGACAATATCCTGCTGCTGGCGCAACAATTGATGGAACAGTTACCTTGTATGTCTCCGTTGCA
TCAACCGGTACCAGTAGCGATTCCTCAACAGGAAGCTCCACTAGCACAAGTACTTCGACAGATAGCGGACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

53.549

97.59

0.523

  stkP Streptococcus pneumoniae D39

53.395

97.59

0.521

  stkP Streptococcus pneumoniae R6

53.395

97.59

0.521

  stkP Streptococcus pneumoniae Rx1

53.241

97.59

0.52

  stkP/pknB Streptococcus salivarius strain HSISS4

52.479

88.102

0.462

  pknB Streptococcus mutans UA159

55.14

80.572

0.444