Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NQZ90_RS00745 | Genome accession | NZ_CP102148 |
| Coordinates | 119464..120417 (+) | Length | 317 a.a. |
| NCBI ID | WP_141599728.1 | Uniprot ID | A0A540U5A3 |
| Organism | Streptococcus suis strain DNC15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 114464..125417
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ90_RS00705 (NQZ90_00705) | - | 114727..115677 (-) | 951 | WP_014637311.1 | S66 peptidase family protein | - |
| NQZ90_RS00710 (NQZ90_00710) | comYA | 115763..116713 (+) | 951 | WP_203200325.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NQZ90_RS00715 (NQZ90_00715) | comYB | 116625..117662 (+) | 1038 | WP_257110428.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NQZ90_RS00720 (NQZ90_00720) | comYC | 117664..117945 (+) | 282 | WP_141599722.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NQZ90_RS00725 (NQZ90_00725) | comGD | 117926..118333 (+) | 408 | WP_141599724.1 | competence type IV pilus minor pilin ComGD | - |
| NQZ90_RS00730 (NQZ90_00730) | comYE | 118305..118598 (+) | 294 | WP_024405248.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NQZ90_RS00735 (NQZ90_00735) | comGF/cglF | 118585..119019 (+) | 435 | WP_141599726.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NQZ90_RS00740 (NQZ90_00740) | comGG | 118997..119407 (+) | 411 | WP_024415503.1 | competence type IV pilus minor pilin ComGG | - |
| NQZ90_RS00745 (NQZ90_00745) | comYH | 119464..120417 (+) | 954 | WP_141599728.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NQZ90_RS00750 (NQZ90_00750) | - | 120467..121654 (+) | 1188 | WP_013730078.1 | acetate kinase | - |
| NQZ90_RS00755 (NQZ90_00755) | - | 121968..122519 (+) | 552 | WP_257110272.1 | folate family ECF transporter S component | - |
| NQZ90_RS00760 (NQZ90_00760) | - | 122574..123830 (+) | 1257 | WP_257110273.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| NQZ90_RS00765 (NQZ90_00765) | pepA | 123876..124937 (-) | 1062 | WP_172087485.1 | glutamyl aminopeptidase | - |
| NQZ90_RS00770 (NQZ90_00770) | - | 125084..125368 (+) | 285 | WP_012774909.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35774.91 Da Isoelectric Point: 4.4696
>NTDB_id=714988 NQZ90_RS00745 WP_141599728.1 119464..120417(+) (comYH) [Streptococcus suis strain DNC15]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIIAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIIAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=714988 NQZ90_RS00745 WP_141599728.1 119464..120417(+) (comYH) [Streptococcus suis strain DNC15]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAGCAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACAGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTCTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTATTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAGCAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACAGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTCTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTATTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |