Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   NQZ91_RS09840 Genome accession   NZ_CP102145
Coordinates   1962951..1964963 (+) Length   670 a.a.
NCBI ID   WP_257117458.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1957951..1969963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS09825 (NQZ91_09825) fmt 1959945..1960883 (+) 939 WP_105123450.1 methionyl-tRNA formyltransferase -
  NQZ91_RS09830 (NQZ91_09830) rsmB 1960864..1962180 (+) 1317 WP_257117457.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  NQZ91_RS09835 (NQZ91_09835) - 1962214..1962951 (+) 738 WP_105111228.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  NQZ91_RS09840 (NQZ91_09840) stkP 1962951..1964963 (+) 2013 WP_257117458.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  NQZ91_RS09845 (NQZ91_09845) - 1964968..1966224 (-) 1257 WP_257117459.1 ISL3 family transposase -
  NQZ91_RS09850 (NQZ91_09850) liaF 1966460..1967155 (+) 696 WP_105123453.1 cell wall-active antibiotics response protein LiaF -
  NQZ91_RS09855 (NQZ91_09855) - 1967155..1968171 (+) 1017 WP_125265442.1 sensor histidine kinase -
  NQZ91_RS09860 (NQZ91_09860) - 1968143..1968784 (+) 642 WP_105111231.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 670 a.a.        Molecular weight: 72646.45 Da        Isoelectric Point: 5.8741

>NTDB_id=714969 NQZ91_RS09840 WP_257117458.1 1962951..1964963(+) (stkP) [Streptococcus suis strain DNS20]
MIQIGKIFAGRYRIIRQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDQIAVQRFQREARAMADLNHPNIVRITDIG
EEDGQQYLAMEYVNGLDLKRYIQENSPLDNDDAVRIMGQILLAIRMAHTRGIIHRDLKPQNVLLTQDGVAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGVILFEMLTGRIPFDGDSAVTIALQHFQKPMPSVREANPNVP
QALENVVLKATAKKLTDRYKSIAEMYTDMASALSYNRRNEQRVVLDENKVDSKTLPKLSQVASEKKVDTPVESSPAPAAV
APKTKPTSSAKKPKAKKRIRTRYKVLMIAIGLLLAAFFAILFNTPATVTVPDVVGQTLEVATEEIETAGLRVGTVTNEAS
TEVAEGQVIRTTPAANSKRKEGSRVNIVIAMEEGVNIPDLSGDELAKAQEKLEALGFKVEVEEEYSEKVKQGRVIRTKPE
WETSQPKGSTVVLVVSRGAEPVDVPDVSGRSVNDATHALEAVGLKVSSTKEEYSDYLEAGQVIGTDPAANTSVSKGSSLV
LIVSKGQRPLMPDFGILTTSYSDARKQLEALGIKSIERVEDSSYSTSERNLVVGQSPLPGQPITDSVTIYVSIPTVTPES
SSSSTSSTEESTTTSTSSSNNGSLSTVVGR

Nucleotide


Download         Length: 2013 bp        

>NTDB_id=714969 NQZ91_RS09840 WP_257117458.1 1962951..1964963(+) (stkP) [Streptococcus suis strain DNS20]
ATGATTCAAATCGGTAAGATTTTTGCCGGTCGGTATCGGATCATTCGGCAGATAGGCCGAGGAGGAATGGCTGATGTCTA
CCTGGCAAAGGATCTGATTTTGGATGGTGAGGAGGTTGCTGTAAAAGTTCTCCGGACCAATTACCAGACAGATCAAATTG
CTGTTCAACGTTTTCAGCGTGAAGCCAGAGCCATGGCTGATCTCAATCACCCAAATATCGTACGGATTACGGATATTGGT
GAGGAAGATGGTCAGCAATACCTGGCCATGGAATATGTTAATGGCCTGGACTTGAAGCGCTATATCCAGGAAAATTCACC
CTTGGATAATGATGATGCGGTCCGTATCATGGGGCAAATCTTGCTGGCTATCCGTATGGCCCACACCCGCGGTATTATCC
ATAGGGATTTGAAACCTCAGAACGTCCTTCTAACGCAAGATGGCGTGGCCAAGGTAACGGATTTCGGGATTGCGGTTGCC
TTTGCAGAGACCAGTTTGACCCAGACAAATTCGATGTTGGGCTCGGTTCACTATCTCTCGCCAGAACAGGCGCGGGGGTC
CAAGGCTACAGTGCAAAGTGATATTTATGCCATGGGGGTCATTCTCTTTGAGATGCTGACAGGACGAATTCCTTTTGATG
GCGATAGCGCTGTAACCATTGCTCTCCAGCATTTCCAAAAGCCCATGCCATCTGTCCGCGAGGCCAATCCAAACGTACCG
CAGGCTCTGGAAAATGTTGTCTTAAAAGCAACAGCCAAGAAATTGACAGACCGCTACAAGTCCATTGCGGAAATGTACAC
GGATATGGCTTCAGCCTTGTCCTACAATCGCCGCAATGAGCAGCGGGTGGTGTTGGATGAAAACAAGGTGGATTCAAAAA
CCCTGCCTAAATTATCCCAGGTTGCTTCAGAGAAAAAAGTAGATACACCAGTGGAGTCTTCACCAGCTCCAGCAGCAGTT
GCTCCAAAAACTAAGCCGACGTCATCAGCCAAGAAGCCCAAGGCAAAAAAGAGGATTCGTACCCGCTATAAGGTATTGAT
GATTGCTATTGGCCTTCTCTTGGCGGCCTTCTTCGCCATTCTTTTTAATACTCCAGCCACAGTGACAGTGCCGGATGTTG
TGGGGCAAACCTTGGAAGTTGCGACGGAGGAGATTGAGACAGCCGGATTGCGCGTGGGTACGGTGACCAATGAAGCTTCG
ACGGAAGTCGCAGAAGGTCAAGTTATTCGGACAACACCTGCTGCTAATTCCAAGCGCAAAGAAGGTTCCCGTGTCAATAT
TGTCATTGCCATGGAAGAAGGTGTCAACATTCCTGATTTGTCTGGTGATGAATTGGCGAAAGCCCAGGAAAAACTAGAGG
CTCTTGGCTTCAAAGTGGAAGTGGAAGAAGAGTATAGCGAGAAGGTCAAACAGGGCCGGGTGATTCGGACCAAGCCAGAA
TGGGAGACCAGTCAGCCAAAAGGTTCAACCGTTGTCTTGGTTGTTTCCAGAGGGGCTGAGCCAGTTGATGTACCGGATGT
ATCTGGACGTAGTGTGAATGATGCTACCCATGCCCTAGAAGCTGTCGGTTTGAAGGTTTCTTCGACCAAGGAAGAATACA
GCGACTACTTAGAAGCTGGTCAGGTAATCGGAACAGACCCTGCAGCCAATACCAGTGTTTCTAAGGGTTCTAGCCTGGTT
CTCATTGTTTCAAAAGGTCAACGACCACTCATGCCAGATTTTGGTATCTTGACGACTTCCTACTCAGATGCTAGAAAACA
GCTGGAAGCTTTGGGAATTAAAAGTATTGAGCGCGTGGAAGACTCGAGTTATTCGACTAGTGAGCGAAATCTGGTCGTAG
GACAAAGTCCTCTGCCAGGTCAACCTATTACTGACTCTGTCACAATTTATGTATCCATTCCTACGGTGACACCAGAGTCC
AGCAGTAGCAGCACTAGCTCGACAGAAGAATCAACGACGACTAGTACGTCTTCATCAAATAATGGCTCTTTGTCAACTGT
AGTGGGTAGATGA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(12-233)

PASTA domain (PASTA)

(368-429)

PASTA domain (PASTA)

(579-632)

PASTA domain (PASTA)

(435-496)

PASTA domain (PASTA)

(502-565)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

54.449

98.955

0.539
  stkP Streptococcus pneumoniae D39

54.148

98.955

0.536
  stkP Streptococcus pneumoniae R6

54.148

98.955

0.536
  stkP Streptococcus pneumoniae Rx1

53.997

98.955

0.534
  stkP/pknB Streptococcus salivarius strain HSISS4

52.801

87.91

0.464
  pknB Streptococcus mutans UA159

51.361

87.761

0.451