Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NQZ91_RS08830 Genome accession   NZ_CP102145
Coordinates   1764978..1765685 (+) Length   235 a.a.
NCBI ID   WP_172068288.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1759978..1770685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS08815 (NQZ91_08815) - 1761432..1762172 (-) 741 WP_105111539.1 amino acid ABC transporter ATP-binding protein -
  NQZ91_RS08820 (NQZ91_08820) - 1762165..1763730 (-) 1566 WP_257117368.1 ABC transporter substrate-binding protein/permease -
  NQZ91_RS08825 (NQZ91_08825) - 1764023..1764859 (+) 837 WP_257117369.1 undecaprenyl-diphosphate phosphatase -
  NQZ91_RS08830 (NQZ91_08830) mecA 1764978..1765685 (+) 708 WP_172068288.1 adaptor protein MecA Regulator
  NQZ91_RS08835 (NQZ91_08835) - 1765682..1766863 (+) 1182 WP_172073706.1 glycosyltransferase family 4 protein -
  NQZ91_RS08840 (NQZ91_08840) sufC 1767034..1767807 (+) 774 WP_105111544.1 Fe-S cluster assembly ATPase SufC -
  NQZ91_RS08845 (NQZ91_08845) sufD 1767824..1769086 (+) 1263 WP_257117370.1 Fe-S cluster assembly protein SufD -
  NQZ91_RS08850 (NQZ91_08850) - 1769088..1769636 (+) 549 WP_257117371.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27268.73 Da        Isoelectric Point: 4.0369

>NTDB_id=714964 NQZ91_RS08830 WP_172068288.1 1764978..1765685(+) (mecA) [Streptococcus suis strain DNS20]
MKVKQISDSTLKITILLDDLEERGMEIADFLMPHEKTEEFFYSVLDELELPLTFRESGMLSFRVTPKPDKVDIFVTKSEI
DKHINFEDLADFDNLDEVSQMTPADFLQSLEKTLKDKSAYDKDAVQRLADIEAEEEAEPYIYYVLHFDHLHEVVQFAQAI
DVDFEESELYKMNDDYFMTVLLDVSDRSADYPDYLLSRMLEYTDDSTVTRPVLQEHGQVLLPLAAVEELKKVSLA

Nucleotide


Download         Length: 708 bp        

>NTDB_id=714964 NQZ91_RS08830 WP_172068288.1 1764978..1765685(+) (mecA) [Streptococcus suis strain DNS20]
ATGAAAGTAAAACAAATTAGTGATTCGACCTTGAAAATCACTATTCTATTAGATGATTTGGAAGAAAGAGGCATGGAGAT
TGCGGATTTTCTTATGCCCCATGAGAAGACGGAGGAATTCTTTTATTCTGTTTTAGATGAATTGGAGTTGCCCCTGACAT
TTCGAGAAAGTGGCATGCTCAGTTTTCGCGTAACGCCCAAGCCTGACAAGGTCGATATTTTTGTAACCAAGTCAGAGATT
GATAAGCACATCAACTTTGAGGACTTGGCTGACTTTGATAATCTCGATGAGGTCAGTCAGATGACGCCGGCGGATTTTCT
TCAGTCTTTGGAGAAAACCCTGAAAGATAAGAGCGCCTATGACAAGGATGCGGTACAGCGTCTGGCAGATATAGAGGCTG
AAGAAGAGGCAGAGCCCTATATCTACTACGTTCTGCACTTTGATCATTTGCACGAAGTGGTTCAATTCGCCCAGGCCATC
GATGTGGATTTTGAAGAATCAGAGCTCTACAAGATGAACGATGACTACTTTATGACTGTCCTCTTGGATGTGAGTGACCG
TTCCGCAGATTATCCAGATTACCTCCTGTCTAGAATGTTGGAATACACGGACGACTCTACCGTGACCCGTCCTGTTCTGC
AGGAACATGGCCAAGTCTTGTTGCCTCTAGCCGCTGTTGAGGAATTGAAGAAGGTAAGTCTTGCATGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

54.286

100

0.566
  mecA Streptococcus pneumoniae D39

54.286

100

0.566
  mecA Streptococcus pneumoniae R6

54.286

100

0.566
  mecA Streptococcus pneumoniae TIGR4

54.286

100

0.566
  mecA Streptococcus mutans UA159

49.388

100

0.515
  mecA Streptococcus thermophilus LMD-9

44.118

100

0.447
  mecA Streptococcus thermophilus LMG 18311

43.697

100

0.443