Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NQZ97_RS10050 Genome accession   NZ_CP102136
Coordinates   2063296..2064018 (-) Length   240 a.a.
NCBI ID   WP_257110578.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 2058296..2069018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS10035 (NQZ97_10035) sufD 2059418..2060680 (-) 1263 WP_105130324.1 Fe-S cluster assembly protein SufD -
  NQZ97_RS10040 (NQZ97_10040) sufC 2060697..2061470 (-) 774 WP_105130313.1 Fe-S cluster assembly ATPase SufC -
  NQZ97_RS10045 (NQZ97_10045) - 2062127..2063299 (-) 1173 WP_257110577.1 glycosyltransferase family 4 protein -
  NQZ97_RS10050 (NQZ97_10050) mecA 2063296..2064018 (-) 723 WP_257110578.1 adaptor protein MecA Regulator
  NQZ97_RS10055 (NQZ97_10055) - 2064146..2064982 (-) 837 WP_257110579.1 undecaprenyl-diphosphate phosphatase -
  NQZ97_RS10060 (NQZ97_10060) - 2065107..2066672 (+) 1566 WP_257110580.1 ABC transporter substrate-binding protein/permease -
  NQZ97_RS10065 (NQZ97_10065) - 2066665..2067408 (+) 744 WP_257110581.1 amino acid ABC transporter ATP-binding protein -
  NQZ97_RS10070 (NQZ97_10070) - 2067535..2067744 (-) 210 WP_009910800.1 hypothetical protein -
  NQZ97_RS10075 (NQZ97_10075) - 2067830..2068732 (-) 903 WP_002942264.1 SPFH domain-containing protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27959.55 Da        Isoelectric Point: 4.0497

>NTDB_id=714650 NQZ97_RS10050 WP_257110578.1 2063296..2064018(-) (mecA) [Streptococcus suis strain M105052_S26]
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRECGMLSFRVTPKPDRVDIFVTKSDL
DQSLNFDEFTDLSELGDVASMTPDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPALQEHGALMLPLAAIEELRKVPTV

Nucleotide


Download         Length: 723 bp        

>NTDB_id=714650 NQZ97_RS10050 WP_257110578.1 2063296..2064018(-) (mecA) [Streptococcus suis strain M105052_S26]
ATGAAAGTAAAGCAAATTAGTGATTCAACCTTGAAAATCACTATAAAATTAGATGATTTGGAAGAGAGAGGAATGGAACT
TTCGGACTTTCTCATTCCGCAAGAAAAGACAGAGGAGTTCTTCTATACTGTTTTGGATGAATTGGATTTACCAATGACTT
TCCGAGAATGCGGTATGTTGAGTTTTCGTGTGACTCCGAAGCCAGATCGGGTGGACATCTTTGTTACCAAATCTGATTTG
GATCAGAGCTTGAATTTCGATGAATTTACAGATTTGTCGGAACTTGGTGATGTCGCAAGTATGACTCCAGATGAGTTTTT
CAAGAGTTTGGAGCAAACCGTTCGTGAGAAAAGCGCACCGGATGCAACAGCCGTTCGTCATTTGGAAGAGGTAGAGCAAG
AGGAAGAAGCAGATGAAGAGGAGCAGGAGCGCTATATTTACTATATTTTGGAATTTCCAACGATAGAGGATCTGTTTACT
TTTGTTGGTACGGTTGATTATCCAGTAGAAGAATCGGAATTATATAAAATGGATGGTCACTACTACTTGACAGTTCTTAT
CAATGTAGAAAATCGTTCCAAGCAGTATCCAGGCTACATTCTCTCACGAATGTTGGAATTTACCAATGATACGAAGTTGA
CCAGACCTGCTTTACAAGAACACGGAGCTTTGATGCTTCCGCTTGCGGCAATCGAGGAGCTTAGGAAGGTTCCGACAGTA
TGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-234)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

51.639

100

0.525
  mecA Streptococcus pneumoniae D39

51.639

100

0.525
  mecA Streptococcus pneumoniae R6

51.639

100

0.525
  mecA Streptococcus pneumoniae TIGR4

51.639

100

0.525
  mecA Streptococcus mutans UA159

49.59

100

0.504
  mecA Streptococcus thermophilus LMD-9

46.667

100

0.467
  mecA Streptococcus thermophilus LMG 18311

46.25

100

0.463