Detailed information NTG0711862

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NPN27_RS03040
• Genome accession: NZ_CP101739
• Coordinates: 640705..641769 (+)
• Length: 354 a.a.
• NCBI ID: WP_048328486.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain J15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 635705..646769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPN27_RS03025 (NPN27_03025)	-	635831..636625 (+)	795	WP_017244289.1	thermonuclease family protein	-
NPN27_RS03030 (NPN27_03030)	-	636767..638035 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
NPN27_RS03035 (NPN27_03035)	-	638102..640525 (-)	2424	WP_017244290.1	penicillin-binding protein 1A	-
NPN27_RS03040 (NPN27_03040)	comM	640705..641769 (+)	1065	WP_048328486.1	pilus assembly protein PilM	Machinery gene
NPN27_RS03045 (NPN27_03045)	pilN	641769..642341 (+)	573	WP_014595705.1	type 4a pilus biogenesis protein PilN	-
NPN27_RS03050 (NPN27_03050)	pilO	642338..642964 (+)	627	WP_017244292.1	type 4a pilus biogenesis protein PilO	-
NPN27_RS03055 (NPN27_03055)	pilP	642961..643488 (+)	528	WP_013981653.1	type 4a pilus biogenesis lipoprotein PilP	-
NPN27_RS03060 (NPN27_03060)	pilQ	643542..645662 (+)	2121	WP_017244293.1	type IV pilus secretin PilQ	Machinery gene
NPN27_RS03065 (NPN27_03065)	aroK	645666..646211 (+)	546	WP_017244294.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37760.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=711862 NPN27_RS03040 WP_048328486.1 640705..641769(+) (comM) [Stutzerimonas stutzeri strain J15]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=711862 NPN27_RS03040 WP_048328486.1 640705..641769(+) (comM) [Stutzerimonas stutzeri strain J15]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCACCGAATGCCGTCGTCGAAAAGAATA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACGAAGATGATCGAGATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAATCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTACGGATTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTTGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGCCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGTGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCGGGCCTCGATCACATGATTCAGCAGAAGATCGGAACGCAAACTCTAGTGGCTAATCCT
TTTGCCGATATGGCTTTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCCAGTGATGCGCCTGCGTTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463