Detailed information NTG0711772

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NPA28_RS13195
• Genome accession: NZ_CP101718
• Coordinates: 2605576..2606193 (-)
• Length: 205 a.a.
• NCBI ID: WP_106293667.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain S-5
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2600576..2611193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPA28_RS13165 (NPA28_13165)	rpsT	2600879..2601145 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
NPA28_RS13170 (NPA28_13170)	holA	2601160..2602203 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
NPA28_RS13175 (NPA28_13175)	-	2602243..2602392 (-)	150	WP_125825438.1	hypothetical protein	-
NPA28_RS13180 (NPA28_13180)	-	2602433..2602567 (+)	135	WP_010335005.1	YqzM family protein	-
NPA28_RS13185 (NPA28_13185)	comEC	2602606..2604936 (-)	2331	WP_217827826.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NPA28_RS13190 (NPA28_13190)	-	2604940..2605509 (-)	570	WP_044154488.1	ComE operon protein 2	-
NPA28_RS13195 (NPA28_13195)	comEA	2605576..2606193 (-)	618	WP_106293667.1	helix-hairpin-helix domain-containing protein	Machinery gene
NPA28_RS13200 (NPA28_13200)	comER	2606277..2607098 (+)	822	WP_256766239.1	late competence protein ComER	-
NPA28_RS13205 (NPA28_13205)	-	2607163..2607906 (-)	744	WP_059293569.1	class I SAM-dependent methyltransferase	-
NPA28_RS13210 (NPA28_13210)	rsfS	2607903..2608259 (-)	357	WP_044154484.1	ribosome silencing factor	-
NPA28_RS13215 (NPA28_13215)	yqeK	2608277..2608837 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NPA28_RS13220 (NPA28_13220)	-	2608827..2609396 (-)	570	WP_217827796.1	nicotinate-nucleotide adenylyltransferase	-
NPA28_RS13225 (NPA28_13225)	yhbY	2609407..2609697 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
NPA28_RS13230 (NPA28_13230)	aroE	2609697..2610533 (-)	837	WP_215510323.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21983.78 Da
• Isoelectric Point: 4.8667

>NTDB_id=711772 NPA28_RS13195 WP_106293667.1 2605576..2606193(-) (comEA) [Bacillus halotolerans strain S-5]
MNWLNQHKTIIMSAGSAAVLIAVLCLFFFSGHNKEPVKQVVSSEKENAEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSEGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=711772 NPA28_RS13195 WP_106293667.1 2605576..2606193(-) (comEA) [Bacillus halotolerans strain S-5]
TTGAATTGGTTGAACCAACATAAAACGATAATCATGTCAGCGGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGACATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGCCGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATTGATATAAAAGGCGCCGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTGAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCCTATCGGGAAGAGAACGGGCGTTTCCAGACAATTGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Staphylococcus aureus N315	36.937	100	0.4
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.321	100	0.376