Detailed information NTG0711770

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: NPA28_RS13185
• Genome accession: NZ_CP101718
• Coordinates: 2602606..2604936 (-)
• Length: 776 a.a.
• NCBI ID: WP_217827826.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain S-5
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2597606..2609936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPA28_RS13150 (NPA28_13150)	-	2597946..2598284 (-)	339	WP_044154492.1	YqxA family protein	-
NPA28_RS13155 (NPA28_13155)	spoIIP	2598301..2599506 (-)	1206	WP_044154491.1	spore autolysin SpoIIP	-
NPA28_RS13160 (NPA28_13160)	gpr	2599569..2600675 (-)	1107	WP_044154490.1	GPR endopeptidase	-
NPA28_RS13165 (NPA28_13165)	rpsT	2600879..2601145 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
NPA28_RS13170 (NPA28_13170)	holA	2601160..2602203 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
NPA28_RS13175 (NPA28_13175)	-	2602243..2602392 (-)	150	WP_125825438.1	hypothetical protein	-
NPA28_RS13180 (NPA28_13180)	-	2602433..2602567 (+)	135	WP_010335005.1	YqzM family protein	-
NPA28_RS13185 (NPA28_13185)	comEC	2602606..2604936 (-)	2331	WP_217827826.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NPA28_RS13190 (NPA28_13190)	-	2604940..2605509 (-)	570	WP_044154488.1	ComE operon protein 2	-
NPA28_RS13195 (NPA28_13195)	comEA	2605576..2606193 (-)	618	WP_106293667.1	helix-hairpin-helix domain-containing protein	Machinery gene
NPA28_RS13200 (NPA28_13200)	comER	2606277..2607098 (+)	822	WP_256766239.1	late competence protein ComER	-
NPA28_RS13205 (NPA28_13205)	-	2607163..2607906 (-)	744	WP_059293569.1	class I SAM-dependent methyltransferase	-
NPA28_RS13210 (NPA28_13210)	rsfS	2607903..2608259 (-)	357	WP_044154484.1	ribosome silencing factor	-
NPA28_RS13215 (NPA28_13215)	yqeK	2608277..2608837 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NPA28_RS13220 (NPA28_13220)	-	2608827..2609396 (-)	570	WP_217827796.1	nicotinate-nucleotide adenylyltransferase	-
NPA28_RS13225 (NPA28_13225)	yhbY	2609407..2609697 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86314.45 Da
• Isoelectric Point: 7.6272

>NTDB_id=711770 NPA28_RS13185 WP_217827826.1 2602606..2604936(-) (comEC) [Bacillus halotolerans strain S-5]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLFLLIVSIKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQESYDF
KAVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGALEKPKQATVPGTFDYQQYLYRQHI
QWSYSVTSIGNCSEPSDVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTGLGQLTIVSVIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSASVGQFLFYWFDVMMTWTNRLITKIADIDIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFLRLTVSTS
LFCATLILLFVFPYVSSDGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSESHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TSDPASKNNSSLVLWMKTGRLSWLLTGDLEKEGEQEVINVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKNGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2331 bp

>NTDB_id=711770 NPA28_RS13185 WP_217827826.1 2602606..2604936(-) (comEC) [Bacillus halotolerans strain S-5]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTTTCTTCTTATTGTGTCAATCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTGAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGAAAGCTATGACTTC
AAGGCGGTCATTCATAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTGCTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAGCATATT
CAATGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGATGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTGGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGGATTTTGACAGCAGGCCTATTTTACGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCCTCTGTTCTCCGAGCCGCTCTGATGTCGGGCATATACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCATCTATTTTTCAGCA
TATCAAAACGGGTCTGGGACAGCTGACGATTGTATCAGTTATCGCCCAGCTAGGCTCACTGCCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATCATTAGCATTCCAATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAGCATCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GACCAACAGACTGATCACTAAAATCGCTGATATAGATATATTCACAATCATCATCTCACGTCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCTCCGGCTGACAGTGTCCACAAGC
CTTTTTTGTGCAACACTTATCCTGCTCTTTGTTTTCCCTTATGTTAGTTCCGACGGAGAAGTAGATATGATTGATATCGG
TCAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGCGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAGCTTGATGCGCTGATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGATTTGTTTCTGAATCGCATGATGAGAAGGTGCTGCGGACTGCCAGACAGG
AGGGGGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGTCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGCTCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCAATGTGTTCCCGAATATAAAAGCGGATGTGTTAAAGGTAGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAGGTTCTTCAATTGTTAAAGAGCCGATCCATCCGTGTGCTGCGCACGGATCAAAG
CGGCACGATCCAATACACGTACAAAAACGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.253	100	0.793