Detailed information NTG0071151

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K6J67_RS03610
• Genome accession: NZ_AP018776
• Coordinates: 710475..711167 (+)
• Length: 230 a.a.
• NCBI ID: WP_050822711.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-5 isolate 13H30
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 705475..716167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J67_RS03590 (CHBNIII5_06910)	ampD	706743..707303 (-)	561	WP_005648974.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K6J67_RS03595 (CHBNIII5_06920)	pilA	707418..707867 (+)	450	WP_042601842.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
K6J67_RS03600 (CHBNIII5_06930)	pilB	707864..709261 (+)	1398	WP_042601843.1	GspE/PulE family protein	Machinery gene
K6J67_RS03605 (CHBNIII5_06940)	pilC	709258..710478 (+)	1221	WP_042601844.1	type II secretion system F family protein	Machinery gene
K6J67_RS03610 (CHBNIII5_06950)	pilD	710475..711167 (+)	693	WP_050822711.1	A24 family peptidase	Machinery gene
K6J67_RS03615 (CHBNIII5_06960)	rho	711221..712483 (-)	1263	WP_005666690.1	transcription termination factor Rho	-
K6J67_RS03620 (CHBNIII5_06970)	metJ	712731..713048 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
K6J67_RS03625 (CHBNIII5_06980)	cueR	713062..713448 (-)	387	WP_005648963.1	Cu(I)-responsive transcriptional regulator	-
K6J67_RS03630 (CHBNIII5_06990)	-	713525..713731 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J67_RS03635 (CHBNIII5_07000)	-	713805..714011 (+)	207	WP_012054944.1	heavy-metal-associated domain-containing protein	-
K6J67_RS03640 (CHBNIII5_07010)	-	714097..714303 (+)	207	WP_012054944.1	heavy-metal-associated domain-containing protein	-
K6J67_RS03645 (CHBNIII5_07020)	-	714389..714595 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26626.62 Da
• Isoelectric Point: 8.8544

>NTDB_id=71151 K6J67_RS03610 WP_050822711.1 710475..711167(+) (pilD) [Haemophilus influenzae strain CHBN-III-5 isolate 13H30]
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQSSVSSIQQKKCSHILRYFLSVGVGFIFLQIAF
KDSIFTVWLGATLLILWAISYLDWHYQLISTTPCLWLLTIGLFGADNNFSLLTLSESIKSVASFFIVFYAIYWLAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHKKKKEFLPFAPFMNLSAIIIYLVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=71151 K6J67_RS03610 WP_050822711.1 710475..711167(+) (pilD) [Haemophilus influenzae strain CHBN-III-5 isolate 13H30]
ATGATTTACTTCACAATGTTTTTATTAGGCGGCATCTTCGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACCCG
TTTACAGCAAGAGATTTATGCGACTTATATTGAATTATTCCCACAAAACTTTCTGCCATTTCAGTCTAGCGTTTCCTCTA
TTCAACAAAAAAAGTGCAGTCATATTTTGAGGTATTTTTTAAGTGTTGGGGTAGGATTTATATTTTTACAAATTGCCTTC
AAAGATTCTATTTTTACTGTATGGCTAGGAGCCACACTTCTTATCCTTTGGGCAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACGACACCCTGTTTATGGTTACTTACAATCGGTTTATTTGGGGCAGACAATAATTTTTCATTGCTTACGT
TATCTGAAAGTATAAAAAGTGTGGCAAGTTTTTTTATTGTTTTCTACGCAATCTATTGGCTTGCAAAATTCTATTACGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAAAAAGAAAAAAGAATTTTTACCTTTTGCCCCTT
TTATGAATTTATCGGCTATCATCATTTATCTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (93-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	90.435	100	0.904
pilD	Haemophilus influenzae Rd KW20	90	100	0.9