Detailed information NTG0711094

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: NOF67_RS01905
• Genome accession: NZ_CP101640
• Coordinates: 404786..406936 (+)
• Length: 716 a.a.
• NCBI ID: WP_072540369.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain LpYC41
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 399786..411936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NOF67_RS01875	-	400210..401382 (+)	1173	WP_226319713.1	sensor histidine kinase	-
NOF67_RS01880	-	401383..402126 (+)	744	WP_063486822.1	response regulator transcription factor	-
NOF67_RS01885	-	402245..402988 (+)	744	WP_063204018.1	response regulator transcription factor	-
NOF67_RS01890	-	403294..404067 (-)	774	WP_015825123.1	CPBP family intramembrane glutamic endopeptidase	-
NOF67_RS01895	plnF	404166..404324 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
NOF67_RS01900	plnE	404349..404519 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
NOF67_RS01905	comA	404786..406936 (+)	2151	WP_072540369.1	peptide cleavage/export ABC transporter	Regulator
NOF67_RS01910	-	406952..408328 (+)	1377	WP_057136851.1	HlyD family secretion protein	-
NOF67_RS01915	-	408418..409107 (+)	690	WP_074161475.1	CPBP family intramembrane glutamic endopeptidase	-
NOF67_RS01920	-	409175..409843 (+)	669	WP_057136857.1	CPBP family intramembrane glutamic endopeptidase	-
NOF67_RS01925	-	409930..410610 (+)	681	WP_057136858.1	CPBP family intramembrane glutamic endopeptidase	-
NOF67_RS01930	-	410704..411390 (+)	687	WP_057136860.1	CPBP family intramembrane glutamic endopeptidase	-
NOF67_RS01935	-	411506..411793 (+)	288	WP_063722041.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 80097.88 Da
• Isoelectric Point: 6.7530

>NTDB_id=711094 NOF67_RS01905 WP_072540369.1 404786..406936(+) (comA) [Lactiplantibacillus plantarum strain LpYC41]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNRDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQVVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKIAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGMDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=711094 NOF67_RS01905 WP_072540369.1 404786..406936(+) (comA) [Lactiplantibacillus plantarum strain LpYC41]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATAGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATTTGTGGGTCGTATTTCTT
ACAAGTGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCCATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCACTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGATTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGAATGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-648)

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.626	99.581	0.584
comA	Streptococcus pneumoniae Rx1	58.345	99.581	0.581
comA	Streptococcus pneumoniae D39	58.345	99.581	0.581
comA	Streptococcus pneumoniae R6	58.345	99.581	0.581
comA	Streptococcus pneumoniae TIGR4	58.205	99.581	0.58
comA	Streptococcus mitis SK321	58.065	99.581	0.578
comA	Streptococcus gordonii str. Challis substr. CH1	56.964	100	0.571
comA/nlmT	Streptococcus mutans UA159	54.457	100	0.546