Detailed information NTG0710409

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NNL22_RS12970
• Genome accession: NZ_CP101527
• Coordinates: 2924012..2925076 (-)
• Length: 354 a.a.
• NCBI ID: WP_251811395.1
• Uniprot ID: A0A9E8HQI1
• Organism: Alkalimarinus sediminis strain FA028
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2919012..2930076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NNL22_RS12945 (NNL22_12935)	aroK	2919453..2919989 (-)	537	WP_251811390.1	shikimate kinase AroK	-
NNL22_RS12950 (NNL22_12940)	pilQ	2920166..2922280 (-)	2115	WP_251811391.1	type IV pilus secretin PilQ	Machinery gene
NNL22_RS12955 (NNL22_12945)	-	2922296..2922835 (-)	540	WP_251811392.1	pilus assembly protein PilP	-
NNL22_RS12960 (NNL22_12950)	-	2922832..2923452 (-)	621	WP_251811393.1	type 4a pilus biogenesis protein PilO	-
NNL22_RS12965 (NNL22_12955)	-	2923449..2924012 (-)	564	WP_251811394.1	PilN domain-containing protein	-
NNL22_RS12970 (NNL22_12960)	pilM	2924012..2925076 (-)	1065	WP_251811395.1	pilus assembly protein PilM	Machinery gene
NNL22_RS12975 (NNL22_12965)	-	2925253..2927793 (+)	2541	WP_251811396.1	penicillin-binding protein 1A	-
NNL22_RS12980 (NNL22_12970)	-	2927810..2928685 (-)	876	WP_251811397.1	endonuclease/exonuclease/phosphatase family protein	-
NNL22_RS12985 (NNL22_12975)	-	2928756..2929418 (-)	663	WP_251811398.1	thiol:disulfide interchange protein DsbA/DsbL	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38173.10 Da
• Isoelectric Point: 4.1436

>NTDB_id=710409 NNL22_RS12970 WP_251811395.1 2924012..2925076(-) (pilM) [Alkalimarinus sediminis strain FA028]
MFGLIGKKANTLIGIDISSTSVKLLEIGKNGNRYRVESYGVEPLPPNAVVEKNINDAEAVGEVIKRVVAKSRTSSKQAAV
AVAGSAVITKTIQMAAGLSEQELENQITVEADQYIPYPLDEVSIDFEVQGPSEQNPDQVDVLLAACRKENVELREDSLEI
GGLEAKVVDVEAYAMERAFELIEAQMDIDADERTVAVVDIGATMTTLSVLADGKTIYTREQLFGGKQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDMEVLEPFKEAVVQQVARSLQFFFSSSQYNEVDTVVLAGGTASTTGIAEMVQEKVGTTTIVANP
FADMALNSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=710409 NNL22_RS12970 WP_251811395.1 2924012..2925076(-) (pilM) [Alkalimarinus sediminis strain FA028]
GTGTTTGGGTTAATAGGAAAAAAAGCAAATACACTCATTGGGATCGATATCAGCTCAACTTCAGTTAAGCTGCTAGAGAT
CGGAAAAAACGGTAATCGCTATAGAGTTGAAAGCTATGGTGTGGAACCGTTGCCCCCCAATGCTGTTGTAGAGAAGAACA
TCAACGACGCAGAAGCAGTTGGTGAAGTGATTAAGCGCGTTGTCGCTAAATCTAGAACAAGTTCAAAGCAGGCTGCAGTA
GCTGTTGCTGGTTCAGCCGTTATCACTAAGACCATTCAGATGGCTGCGGGGCTTAGTGAACAGGAACTTGAAAACCAGAT
CACGGTTGAAGCTGATCAATACATTCCTTATCCGCTTGATGAAGTCTCGATAGACTTCGAAGTTCAAGGGCCTTCTGAGC
AGAACCCTGACCAAGTTGATGTCTTACTTGCTGCATGCCGAAAAGAAAACGTTGAGCTTCGTGAAGACTCACTCGAAATT
GGTGGGCTTGAAGCAAAGGTAGTTGACGTTGAAGCCTACGCCATGGAGCGTGCCTTTGAGCTGATTGAAGCGCAAATGGA
TATCGATGCAGACGAACGAACTGTTGCCGTCGTTGATATTGGTGCAACCATGACGACTTTAAGCGTTCTTGCGGATGGTA
AAACGATCTACACGAGAGAGCAGTTGTTCGGTGGTAAGCAGTTGACCGAAGAGATTCAGCGTCGCTACGGCTTATCGCAA
GAAGAGGCCGGGCTTGCTAAAAAGCAAGGTGGGCTTCCAGATGATTATGATATGGAAGTGCTCGAACCGTTTAAAGAAGC
AGTTGTTCAACAGGTTGCGCGCTCGTTACAGTTTTTCTTCTCCTCTAGTCAGTATAATGAAGTCGACACAGTTGTTCTTG
CTGGCGGAACGGCGTCCACAACCGGCATCGCCGAGATGGTACAAGAGAAGGTAGGGACGACAACAATTGTTGCAAACCCG
TTTGCAGATATGGCATTAAACTCAAGAGTTAATGCTTCTGCGCTGAGTAATGATGCGCCGTCATTGATGATTGCGTGTGG
ATTGGCGATGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	45.198	100	0.452