Detailed information NTG0707070

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NMD82_RS15420
• Genome accession: NZ_CP100806
• Coordinates: 3382662..3384182 (+)
• Length: 506 a.a.
• NCBI ID: WP_205438994.1
• Uniprot ID: -
• Organism: Edwardsiella tarda strain GT75
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3377662..3389182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD82_RS15395 (NMD82_15355)	-	3377858..3378787 (-)	930	WP_098142764.1	branched-chain amino acid transaminase	-
NMD82_RS15400 (NMD82_15360)	ilvM	3378837..3379127 (-)	291	WP_370553089.1	acetolactate synthase 2 small subunit	-
NMD82_RS15405 (NMD82_15365)	ilvG	3379124..3380773 (-)	1650	WP_205438992.1	acetolactate synthase 2 catalytic subunit	-
NMD82_RS15410 (NMD82_15370)	ilvL	3380911..3381009 (-)	99	WP_071523989.1	ilv operon leader peptide	-
NMD82_RS15415 (NMD82_15375)	-	3381160..3382374 (-)	1215	WP_205438993.1	MFS transporter	-
NMD82_RS15420 (NMD82_15380)	comM	3382662..3384182 (+)	1521	WP_205438994.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NMD82_RS15425 (NMD82_15385)	tdh	3384248..3385273 (-)	1026	WP_205438995.1	L-threonine 3-dehydrogenase	-
NMD82_RS15430 (NMD82_15390)	kbl	3385283..3386479 (-)	1197	WP_205438996.1	glycine C-acetyltransferase	-
NMD82_RS15435 (NMD82_15395)	rfaD	3386787..3387716 (+)	930	WP_205438997.1	ADP-glyceromanno-heptose 6-epimerase	-
NMD82_RS15440 (NMD82_15400)	rfaF	3387740..3388816 (+)	1077	WP_205438998.1	ADP-heptose--LPS heptosyltransferase RfaF	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 54210.39 Da
• Isoelectric Point: 8.7738

>NTDB_id=707070 NMD82_RS15420 WP_205438994.1 3382662..3384182(+) (comM) [Edwardsiella tarda strain GT75]
MTLASVYTRAALGMQAPEVRIEAHIGNGLPGFTLVGLPETAVREAKDRVRCAILNSGFQFPAKRITLNLAPADLPKEGGR
YDLPMALALLLAAGQLSSVHAEHQYEFMGELALSGELRPVPGILPAALSATQAGRTLIAPSGNADELGLLPAPRPLIAPS
LLAVCAFLSEDATLERPARCLPSDDYAQQGDMAEIIGQAQARRALEIAAAGGHNLLLLGPPGTGKTMLAYRLPGILPPMT
SDEALAQAAISSLAYPGSMQARYGVRPFRAPHHSASMAALIGGGSLPRPGEISLAHHGVLFLDELAEFDRRTLDALREPL
ESGVVHLSRAQLKISFPARVQLVAAMNPSHVGFGSRAGGRTTPNQVLRYLSRLSGPLLDRFDLSIDVPLLPAGVLASQRA
MGEDSATLRQRVTAVRDRQYSRSGQLNAHLEGAERDRVCRLSTHDAQFLEQALTRLGLSVRAWHRLLKVARTLADMEGVE
TIAQRHLAEALSYRAVDRLLQTLQRG

Nucleotide

• Length: 1521 bp

>NTDB_id=707070 NMD82_RS15420 WP_205438994.1 3382662..3384182(+) (comM) [Edwardsiella tarda strain GT75]
ATGACACTGGCCAGCGTATACACCCGTGCCGCCCTCGGCATGCAAGCCCCCGAAGTCAGGATCGAGGCACATATTGGCAA
TGGATTGCCGGGTTTTACTCTGGTGGGTCTCCCGGAGACGGCGGTGCGTGAGGCGAAAGATCGTGTACGCTGCGCCATCC
TAAACAGCGGATTCCAGTTTCCGGCTAAACGCATCACCCTCAACCTGGCTCCCGCCGACCTCCCGAAGGAGGGAGGCCGC
TACGATCTTCCCATGGCACTGGCCCTATTGCTCGCCGCAGGGCAACTCTCCAGCGTACACGCCGAGCATCAATATGAGTT
TATGGGTGAACTCGCCCTCTCCGGTGAACTCCGCCCGGTGCCGGGTATTCTACCGGCCGCGCTGAGTGCCACACAGGCGG
GGCGAACCTTAATCGCCCCCAGTGGCAACGCCGATGAGCTCGGGCTATTGCCCGCACCGCGCCCCCTCATCGCCCCGTCC
CTACTTGCCGTCTGCGCCTTCCTCAGTGAGGACGCCACATTGGAAAGACCAGCGCGCTGTCTACCCAGTGACGACTATGC
ACAGCAGGGGGACATGGCTGAGATCATCGGCCAAGCGCAGGCCCGGCGTGCCCTGGAGATCGCCGCCGCCGGGGGACACA
ACCTGCTACTGCTTGGACCACCGGGTACCGGTAAAACGATGCTGGCCTATCGCCTACCGGGGATCCTGCCACCGATGACC
AGCGATGAGGCATTAGCACAGGCCGCCATCAGTAGCCTGGCATATCCAGGTTCGATGCAGGCACGCTATGGTGTTCGTCC
CTTTCGCGCACCACACCATAGCGCCTCGATGGCGGCACTGATCGGCGGCGGATCCCTGCCGCGTCCTGGAGAGATCTCTC
TGGCGCATCACGGCGTGCTCTTCCTTGATGAATTAGCCGAGTTCGATCGGCGTACCTTGGATGCGCTGCGCGAGCCGTTA
GAGTCAGGTGTTGTCCACCTCTCCCGTGCCCAGCTCAAAATCAGCTTTCCCGCCCGCGTACAATTAGTCGCGGCGATGAA
TCCCAGCCATGTGGGATTTGGGAGCCGCGCGGGAGGACGCACCACACCGAATCAGGTGCTGCGCTACCTCTCTCGCCTTT
CTGGGCCGCTGCTCGACCGCTTCGATCTCTCGATTGACGTCCCCCTATTACCCGCGGGAGTCTTGGCCAGCCAACGAGCG
ATGGGCGAAGACAGCGCCACGCTGCGTCAACGCGTTACCGCTGTCCGTGATCGACAGTATTCGCGCAGCGGTCAGTTGAA
TGCTCATCTCGAGGGCGCAGAGCGCGATCGTGTCTGCCGCCTGAGTACACACGATGCACAATTTCTAGAACAGGCCCTGA
CACGCCTCGGTTTATCGGTACGCGCTTGGCACCGGCTGCTCAAGGTCGCTCGTACACTCGCGGACATGGAGGGCGTCGAG
ACTATCGCCCAACGCCATCTGGCTGAAGCGCTGAGCTATCGCGCCGTCGATCGGCTCTTACAGACATTGCAACGGGGGTA
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (21-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	58.648	99.407	0.583
comM	Haemophilus influenzae Rd KW20	56.805	100	0.569
comM	Vibrio campbellii strain DS40M4	57.256	99.407	0.569
comM	Glaesserella parasuis strain SC1401	54.724	100	0.549
comM	Legionella pneumophila str. Paris	46.092	98.617	0.455
comM	Legionella pneumophila strain ERS1305867	46.092	98.617	0.455
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.333	100	0.437