Detailed information NTG0706100

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NLS69_RS28790
• Genome accession: NZ_CP100653
• Coordinates: 6158368..6159861 (+)
• Length: 497 a.a.
• NCBI ID: WP_023117957.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain F13
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 6153368..6164861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLS69_RS28760 (NLS69_28760)	-	6153502..6154416 (-)	915	WP_058142613.1	fimbrial protein	-
NLS69_RS28765 (NLS69_28765)	sutA	6154840..6155157 (-)	318	WP_003457840.1	transcriptional regulator SutA	-
NLS69_RS28770 (NLS69_28770)	-	6155235..6155660 (-)	426	WP_073652855.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
NLS69_RS28775 (NLS69_28775)	-	6155921..6157249 (-)	1329	WP_073652856.1	ammonium transporter	-
NLS69_RS28780 (NLS69_28780)	glnK	6157289..6157627 (-)	339	WP_003096476.1	P-II family nitrogen regulator	-
NLS69_RS28785 (NLS69_28785)	-	6158067..6158327 (+)	261	WP_003096478.1	accessory factor UbiK family protein	-
NLS69_RS28790 (NLS69_28790)	comM	6158368..6159861 (+)	1494	WP_023117957.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NLS69_RS28795 (NLS69_28795)	betT	6159986..6161971 (+)	1986	WP_003096496.1	choline BCCT transporter BetT	-
NLS69_RS28800 (NLS69_28800)	pchP	6162014..6163063 (-)	1050	WP_254575205.1	phosphorylcholine phosphatase	-
NLS69_RS28805 (NLS69_28805)	-	6163214..6164131 (-)	918	WP_003098255.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 53097.06 Da
• Isoelectric Point: 7.9587

>NTDB_id=706100 NLS69_RS28790 WP_023117957.1 6158368..6159861(+) (comM) [Pseudomonas aeruginosa strain F13]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALTGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEVSERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRAMTST

Nucleotide

• Length: 1494 bp

>NTDB_id=706100 NLS69_RS28790 WP_023117957.1 6158368..6159861(+) (comM) [Pseudomonas aeruginosa strain F13]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTACCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
CGGCGAACTGGCCCTGACCGGGGCGATCCGCCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCCGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAAGCCCTGGAGGTCGCGGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTCGGCGATCCCAGTGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGGTCAGCGAACGGGTGGGCGCCGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGATCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCAATGACCTCCACGTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.382	100	0.569
comM	Vibrio campbellii strain DS40M4	56.539	100	0.565
comM	Vibrio cholerae strain A1552	56.137	100	0.561
comM	Glaesserella parasuis strain SC1401	55.378	100	0.559
comM	Legionella pneumophila str. Paris	49.9	100	0.501
comM	Legionella pneumophila strain ERS1305867	49.9	100	0.501
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.866	100	0.469