NTDB

Overview

Name	comA	Type	Regulator
Locus tag	OK783_RS00650	Genome accession	NZ_CP115654
Coordinates	137258..137539 (+)	Length	93 a.a.
NCBI ID	WP_003696701.1	Uniprot ID	A0A0H4IVZ5
Organism	Neisseria gonorrhoeae strain FA1090 N-1-60
Function	processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 132258..142539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OK783_RS00605 (OK783_00605)	-	132364..133518 (+)	1155	WP_003694771.1	cupin domain-containing protein	-
OK783_RS00610 (OK783_00610)	-	133527..133754 (+)	228	WP_025456393.1	hypothetical protein	-
OK783_RS00615 (OK783_00615)	-	133747..134100 (+)	354	WP_003704890.1	hypothetical protein	-
OK783_RS00620 (OK783_00620)	-	134161..135435 (+)	1275	WP_003696697.1	HlyD family secretion protein	-
OK783_RS00625 (OK783_00625)	-	135620..135967 (+)	348	WP_003687399.1	hypothetical protein	-
OK783_RS00630 (OK783_00630)	-	135981..136196 (+)	216	WP_003687400.1	hypothetical protein	-
OK783_RS00635 (OK783_00635)	-	136298..136849 (+)	552	Protein_122	cysteine peptidase family C39 domain-containing protein	-
OK783_RS00640 (OK783_00640)	-	136835..137065 (+)	231	WP_225577515.1	ATP-binding cassette domain-containing protein	-
OK783_RS00645 (OK783_00645)	-	137063..137179 (-)	117	Protein_124	IS5/IS1182 family transposase	-
OK783_RS00650 (OK783_00650)	comA	137258..137539 (+)	282	WP_003696701.1	ATP-binding cassette domain-containing protein	Regulator
OK783_RS00655 (OK783_00655)	-	137560..138786 (-)	1227	WP_003690589.1	YihY family inner membrane protein	-
OK783_RS11360	-	138885..139070 (+)	186	Protein_127	NAD(P)H-quinone oxidoreductase	-
OK783_RS00665 (OK783_00665)	queC	139274..139948 (+)	675	WP_010950996.1	7-cyano-7-deazaguanine synthase QueC	-
OK783_RS00670 (OK783_00670)	-	139976..140491 (+)	516	WP_003687408.1	DUF1543 domain-containing protein	-
OK783_RS00675 (OK783_00675)	queD	140579..141001 (+)	423	WP_003704886.1	6-carboxytetrahydropterin synthase QueD	-
OK783_RS00680 (OK783_00680)	-	141267..141638 (+)	372	WP_003702290.1	DUF1304 domain-containing protein	-
OK783_RS00685 (OK783_00685)	-	141635..142273 (+)	639	WP_025456391.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

Download Length: 93 a.a. Molecular weight: 10117.78 Da Isoelectric Point: 6.4598

                                >NTDB_id=705792 OK783_RS00650 WP_003696701.1 137258..137539(+) (comA) [Neisseria gonorrhoeae strain FA1090 N-1-60]

MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRK

ETVESADRKMSLG

Nucleotide

Download Length: 282 bp

                                >NTDB_id=705792 OK783_RS00650 WP_003696701.1 137258..137539(+) (comA) [Neisseria gonorrhoeae strain FA1090 N-1-60]

ATGATTCGCGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTGATCGGCGATATGGGCAGCGCACTGTCAGGCGG

ACAAAAACAACGTATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGGCCAGTCATT

TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATTATAAAAATTATGGCGGCACACAGAAAG

GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-51)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H4IVZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comA	Streptococcus mitis SK321	46.154	97.849	0.452
comA	Streptococcus mitis NCTC 12261	45.055	97.849	0.441
comA	Streptococcus pneumoniae TIGR4	45.055	97.849	0.441
comA	Streptococcus pneumoniae Rx1	45.055	97.849	0.441
comA	Streptococcus pneumoniae R6	45.055	97.849	0.441
comA	Streptococcus pneumoniae D39	45.055	97.849	0.441
comA/nlmT	Streptococcus mutans UA159	47.126	93.548	0.441
comA	Streptococcus gordonii str. Challis substr. CH1	43.956	97.849	0.43

Detailed information NTG0705792