Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   SA27298_RS02085 Genome accession   NZ_AP018548
Coordinates   410010..410684 (-) Length   224 a.a.
NCBI ID   WP_018543646.1    Uniprot ID   A0A448AIB9
Organism   Streptococcus anginosus strain CCUG 27928     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 405010..415684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS02055 (SA27298_0420) rsmD 405614..406162 (+) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SA27298_RS02060 (SA27298_0421) coaD 406152..406649 (+) 498 WP_003032432.1 pantetheine-phosphate adenylyltransferase -
  SA27298_RS02065 (SA27298_0422) sepM 406630..407685 (+) 1056 WP_003032358.1 SepM family pheromone-processing serine protease Regulator
  SA27298_RS02070 (SA27298_0423) - 407825..408388 (+) 564 WP_026248195.1 YutD family protein -
  SA27298_RS02075 (SA27298_0424) rlmN 408422..409504 (+) 1083 WP_018543645.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SA27298_RS02080 (SA27298_0425) - 409497..410015 (+) 519 WP_003032357.1 VanZ family protein -
  SA27298_RS02085 (SA27298_0426) cclA/cilC 410010..410684 (-) 675 WP_018543646.1 A24 family peptidase Machinery gene
  SA27298_RS02090 (SA27298_0427) - 410838..411365 (+) 528 WP_003032411.1 Dps family protein -
  SA27298_RS02095 (SA27298_0428) - 411639..411863 (+) 225 WP_003025724.1 YqgQ family protein -
  SA27298_RS02100 (SA27298_0429) - 411857..412237 (+) 381 WP_018543647.1 rhodanese-like domain-containing protein -
  SA27298_RS02105 (SA27298_0430) - 412258..412983 (-) 726 WP_003032391.1 pseudouridine synthase -
  SA27298_RS02110 (SA27298_0431) typA 413161..415002 (+) 1842 WP_003032385.1 translational GTPase TypA -
  SA27298_RS02115 (SA27298_0432) - 415067..415351 (+) 285 WP_003025714.1 DUF3165 family protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 25185.47 Da        Isoelectric Point: 8.3081

>NTDB_id=69964 SA27298_RS02085 WP_018543646.1 410010..410684(-) (cclA/cilC) [Streptococcus anginosus strain CCUG 27928]
MIHFYFFLVGSIVASFLGLVVDRFPEQSILVPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCNSKIPIRYILLELTGG
CLFLATSLGYLNINRLVLLAMGMTLSLYDQREQEYPLLIWLIFHIFLLFLTSFNLLMVAFLALGILAHFVDLRIGAGDFL
FLASCSTIFHLTEVLLIIQIASIIGLLLFGLKSKKDRLAFVPCLFCGSSILIMIQFIVLHQNAL

Nucleotide


Download         Length: 675 bp        

>NTDB_id=69964 SA27298_RS02085 WP_018543646.1 410010..410684(-) (cclA/cilC) [Streptococcus anginosus strain CCUG 27928]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTAGCTTCCTTTTTAGGGCTGGTCGTTGATCGTTTCCCTGAACA
GTCTATTCTCGTTCCTTCCAGTCATTGTAATGCTTGTGGACAGAAATTAGCACCTCGTGATTTAGTCCCTGTCCTTTCTC
AGCTTATCAATCGACTGCGTTGTCGGTTTTGCAACTCAAAAATTCCCATCCGTTACATCCTTCTAGAACTAACTGGTGGC
TGTCTCTTTCTTGCAACATCTTTAGGTTATCTAAACATCAACCGGCTCGTTTTGCTTGCAATGGGAATGACCTTATCCCT
TTATGATCAAAGAGAACAAGAATATCCTCTCCTCATCTGGTTAATCTTTCATATTTTTCTCCTTTTTTTGACAAGCTTCA
ATCTTTTAATGGTTGCTTTTTTAGCACTTGGGATTTTGGCTCACTTCGTTGATTTACGTATCGGTGCAGGAGACTTTCTT
TTTCTGGCATCTTGCTCAACTATTTTTCATCTGACTGAAGTTCTTCTCATTATTCAAATTGCTAGTATCATTGGTCTGCT
CCTTTTTGGTTTAAAATCAAAAAAAGACAGGTTAGCCTTTGTTCCCTGTCTTTTCTGTGGTAGCAGCATCCTGATAATGA
TACAATTTATCGTTCTTCACCAAAATGCCTTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A448AIB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

57.075

94.643

0.54

  cclA/cilC Streptococcus mitis NCTC 12261

56.604

94.643

0.536

  cclA/cilC Streptococcus pneumoniae TIGR4

56.132

94.643

0.531

  cclA/cilC Streptococcus pneumoniae Rx1

55.66

94.643

0.527

  cclA/cilC Streptococcus pneumoniae D39

55.66

94.643

0.527

  cclA/cilC Streptococcus pneumoniae R6

55.66

94.643

0.527


Multiple sequence alignment