Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SA27298_RS02065 Genome accession   NZ_AP018548
Coordinates   406630..407685 (+) Length   351 a.a.
NCBI ID   WP_003032358.1    Uniprot ID   A0A3S4NJ72
Organism   Streptococcus anginosus strain CCUG 27928     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 401630..412685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS02035 (SA27298_0416) - 402151..402786 (-) 636 WP_003032900.1 YigZ family protein -
  SA27298_RS02040 (SA27298_0417) comFA/cflA 402843..404144 (+) 1302 WP_022524394.1 DEAD/DEAH box helicase Machinery gene
  SA27298_RS02045 (SA27298_0418) comFC/cflB 404141..404806 (+) 666 WP_003032902.1 ComF family protein Machinery gene
  SA27298_RS02050 (SA27298_0419) raiA 404884..405426 (+) 543 WP_003032381.1 ribosome-associated translation inhibitor RaiA -
  SA27298_RS02055 (SA27298_0420) rsmD 405614..406162 (+) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SA27298_RS02060 (SA27298_0421) coaD 406152..406649 (+) 498 WP_003032432.1 pantetheine-phosphate adenylyltransferase -
  SA27298_RS02065 (SA27298_0422) sepM 406630..407685 (+) 1056 WP_003032358.1 SepM family pheromone-processing serine protease Regulator
  SA27298_RS02070 (SA27298_0423) - 407825..408388 (+) 564 WP_026248195.1 YutD family protein -
  SA27298_RS02075 (SA27298_0424) rlmN 408422..409504 (+) 1083 WP_018543645.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SA27298_RS02080 (SA27298_0425) - 409497..410015 (+) 519 WP_003032357.1 VanZ family protein -
  SA27298_RS02085 (SA27298_0426) cclA/cilC 410010..410684 (-) 675 WP_018543646.1 A24 family peptidase Machinery gene
  SA27298_RS02090 (SA27298_0427) - 410838..411365 (+) 528 WP_003032411.1 Dps family protein -
  SA27298_RS02095 (SA27298_0428) - 411639..411863 (+) 225 WP_003025724.1 YqgQ family protein -
  SA27298_RS02100 (SA27298_0429) - 411857..412237 (+) 381 WP_018543647.1 rhodanese-like domain-containing protein -

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38306.34 Da        Isoelectric Point: 10.2305

>NTDB_id=69963 SA27298_RS02065 WP_003032358.1 406630..407685(+) (sepM) [Streptococcus anginosus strain CCUG 27928]
MEKPRNKFKKWPIIAVVGLILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIAGTVTGVN
DKTFNSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSNIPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=69963 SA27298_RS02065 WP_003032358.1 406630..407685(+) (sepM) [Streptococcus anginosus strain CCUG 27928]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGTTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGAATTCAGCATGCGACCTTTGCTCATTTGGTTTATGCTTGGCTG
ACTCCTTTTACGGATATTTATTCGGCGAAAGATTTGACTGGTGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGGTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGGTACCGTGACAGGCGTGAAT
GATAAGACTTTCAACAGTTCAAAAGATTTGATTGATTATGTAGGCTCACAGAAAATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATTATCAAACTTGAAAATGGAAAAAATGGGATTGGTATTAGCT
TAATTGACCGAACAGAAGTCACAAGTAATATACCAATTGAATTTTCAACAGCAGGGATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGCTTGGCTATTTATACACAGATTGCAGACCCGACATTGAGAGATGGCAGAAATATTGCTGGGACAGGATCGAT
TGACCGTGAAGGAAAAGTTGGTGATATTGGTGGGATTGATAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAATTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAAAG
CACGAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3S4NJ72

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.93

97.151

0.621


Multiple sequence alignment