Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | PCP49_RS08795 | Genome accession | NZ_CP115244 |
| Coordinates | 1901897..1902436 (+) | Length | 179 a.a. |
| NCBI ID | WP_003116248.1 | Uniprot ID | Q59651 |
| Organism | Pseudomonas aeruginosa strain F042 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1896897..1907436
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCP49_RS08770 (PCP49_08775) | yacG | 1897064..1897264 (-) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
| PCP49_RS08775 (PCP49_08780) | coaE | 1897261..1897872 (-) | 612 | WP_033982615.1 | dephospho-CoA kinase | - |
| PCP49_RS08780 (PCP49_08785) | pilD | 1897869..1898741 (-) | 873 | WP_016562340.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| PCP49_RS08785 (PCP49_08790) | pilC | 1898744..1899961 (-) | 1218 | WP_003116250.1 | type II secretion system F family protein | Machinery gene |
| PCP49_RS08790 (PCP49_08795) | pilB | 1899965..1901668 (-) | 1704 | WP_003116249.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| PCP49_RS08795 (PCP49_08800) | pilE | 1901897..1902436 (+) | 540 | WP_003116248.1 | pilin | Machinery gene |
| PCP49_RS08800 (PCP49_08805) | - | 1902500..1903198 (+) | 699 | WP_023122772.1 | hypothetical protein | - |
| PCP49_RS08810 (PCP49_08815) | nadC | 1903363..1904211 (-) | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| PCP49_RS08815 (PCP49_08820) | - | 1904497..1906752 (+) | 2256 | WP_033981335.1 | DUF1631 domain-containing protein | - |
Sequence
Protein
Download Length: 179 a.a. Molecular weight: 18003.27 Da Isoelectric Point: 4.6894
>NTDB_id=698306 PCP49_RS08795 WP_003116248.1 1901897..1902436(+) (pilE) [Pseudomonas aeruginosa strain F042]
MTAQKGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGVGLAASAKTLIGDSSATAGELAASARVWNAQAGNAGAT
SKYVTSVQIAEATGEITVTFNAANVGNIPANSTLVFTPYVQNAAGAPTQLGASYASGVTGSIDWGCASDSNAVSSGTDRN
MPALTAGTLPARFAPSECR
MTAQKGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGVGLAASAKTLIGDSSATAGELAASARVWNAQAGNAGAT
SKYVTSVQIAEATGEITVTFNAANVGNIPANSTLVFTPYVQNAAGAPTQLGASYASGVTGSIDWGCASDSNAVSSGTDRN
MPALTAGTLPARFAPSECR
Nucleotide
Download Length: 540 bp
>NTDB_id=698306 PCP49_RS08795 WP_003116248.1 1901897..1902436(+) (pilE) [Pseudomonas aeruginosa strain F042]
ATGACAGCTCAGAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATTCTTGCTGCCGTCGCTTT
GCCGGCATATCAGGATTACACCATTCGTGCTCGCGTGACAGAGGGGGTTGGCTTGGCTGCCAGCGCCAAGACGCTTATTG
GCGATAGCTCTGCCACTGCCGGTGAGCTAGCCGCTTCGGCAAGGGTCTGGAATGCTCAAGCCGGTAACGCCGGTGCTACC
AGTAAGTATGTGACCTCTGTACAAATTGCAGAGGCGACTGGTGAAATCACTGTTACTTTCAATGCCGCAAACGTGGGTAA
TATTCCGGCTAACTCTACCCTGGTATTTACTCCCTATGTGCAGAATGCTGCCGGTGCCCCGACTCAATTGGGTGCCAGTT
ATGCTTCCGGTGTGACTGGCTCTATTGACTGGGGTTGTGCATCGGACTCCAACGCGGTTTCCAGTGGTACCGACCGCAAT
ATGCCTGCCCTGACTGCAGGTACCCTGCCGGCTCGTTTCGCTCCTAGCGAATGCCGCTAA
ATGACAGCTCAGAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATTCTTGCTGCCGTCGCTTT
GCCGGCATATCAGGATTACACCATTCGTGCTCGCGTGACAGAGGGGGTTGGCTTGGCTGCCAGCGCCAAGACGCTTATTG
GCGATAGCTCTGCCACTGCCGGTGAGCTAGCCGCTTCGGCAAGGGTCTGGAATGCTCAAGCCGGTAACGCCGGTGCTACC
AGTAAGTATGTGACCTCTGTACAAATTGCAGAGGCGACTGGTGAAATCACTGTTACTTTCAATGCCGCAAACGTGGGTAA
TATTCCGGCTAACTCTACCCTGGTATTTACTCCCTATGTGCAGAATGCTGCCGGTGCCCCGACTCAATTGGGTGCCAGTT
ATGCTTCCGGTGTGACTGGCTCTATTGACTGGGGTTGTGCATCGGACTCCAACGCGGTTTCCAGTGGTACCGACCGCAAT
ATGCCTGCCCTGACTGCAGGTACCCTGCCGGCTCGTTTCGCTCCTAGCGAATGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
41.451 |
100 |
0.447 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.444 |
100 |
0.447 |
| pilA2 | Legionella pneumophila str. Paris |
42.373 |
98.883 |
0.419 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.808 |
98.883 |
0.413 |
| comP | Acinetobacter baylyi ADP1 |
38.889 |
100 |
0.391 |