Detailed information NTG0698078

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NE424_RS15130
• Genome accession: NZ_CP098795
• Coordinates: 3140786..3141844 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain VB280821
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3135786..3146844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NE424_RS15115 (NE424_15115)	-	3136891..3137223 (+)	333	WP_031965525.1	hypothetical protein	-
NE424_RS15120 (NE424_15120)	-	3137226..3138050 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
NE424_RS15125 (NE424_15125)	ponA	3138068..3140623 (-)	2556	WP_031965526.1	penicillin-binding protein PBP1a	-
NE424_RS15130 (NE424_15130)	pilM	3140786..3141844 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
NE424_RS15135 (NE424_15135)	pilN	3141844..3142485 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
NE424_RS15140 (NE424_15140)	pilO	3142482..3143222 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
NE424_RS15145 (NE424_15145)	pilP	3143233..3143760 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
NE424_RS15150 (NE424_15150)	pilQ	3143823..3145988 (+)	2166	WP_001017035.1	type IV pilus secretin PilQ family protein	Machinery gene
NE424_RS15155 (NE424_15155)	aroK	3146000..3146569 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=698078 NE424_RS15130 WP_002014066.1 3140786..3141844(+) (pilM) [Acinetobacter baumannii strain VB280821]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=698078 NE424_RS15130 WP_002014066.1 3140786..3141844(+) (pilM) [Acinetobacter baumannii strain VB280821]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCCGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCATTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGATCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423