Detailed information NTG0697443

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NDR94_RS13480
• Genome accession: NZ_CP098731
• Coordinates: 2858795..2861020 (-)
• Length: 741 a.a.
• NCBI ID: WP_011913747.1
• Uniprot ID: A4VMT8
• Organism: Stutzerimonas stutzeri strain NRCB010
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2853795..2866020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR94_RS13445 (NDR94_13425)	murB	2854185..2855204 (-)	1020	WP_011913740.1	UDP-N-acetylmuramate dehydrogenase	-
NDR94_RS13450 (NDR94_13430)	-	2855201..2855668 (-)	468	WP_017243959.1	low molecular weight protein-tyrosine-phosphatase	-
NDR94_RS13455 (NDR94_13435)	kdsB	2855670..2856434 (-)	765	WP_017243958.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NDR94_RS13460 (NDR94_13440)	-	2856431..2856616 (-)	186	WP_011913743.1	Trm112 family protein	-
NDR94_RS13465 (NDR94_13445)	lpxK	2856662..2857666 (-)	1005	WP_011913744.1	tetraacyldisaccharide 4'-kinase	-
NDR94_RS13470 (NDR94_13450)	-	2857666..2858094 (-)	429	WP_011913745.1	ExbD/TolR family protein	-
NDR94_RS13475 (NDR94_13455)	-	2858091..2858723 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
NDR94_RS13480 (NDR94_13460)	comA	2858795..2861020 (-)	2226	WP_011913747.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NDR94_RS13485 (NDR94_13465)	-	2861165..2861680 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
NDR94_RS13490 (NDR94_13470)	-	2861693..2862937 (-)	1245	WP_041755914.1	lipoprotein-releasing ABC transporter permease subunit	-
NDR94_RS13495 (NDR94_13475)	lolD	2862937..2863635 (-)	699	WP_041755577.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
NDR94_RS13500 (NDR94_13480)	-	2863643..2864890 (-)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
NDR94_RS13505 (NDR94_13485)	-	2864923..2865558 (+)	636	WP_011913752.1	PilZ domain-containing protein	-
NDR94_RS13510 (NDR94_13490)	-	2865562..2865870 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80992.59 Da
• Isoelectric Point: 9.4516

>NTDB_id=697443 NDR94_RS13480 WP_011913747.1 2858795..2861020(-) (comA) [Stutzerimonas stutzeri strain NRCB010]
MRTWMLALAAGLVLPRFLPALPAQWFCAALVAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLVRLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWCWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAEHCESGSSWQWNDVRFSLWQWQMARDSNQQSCMLQIEANGERILLTGDIDQA
AEQAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLETLDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=697443 NDR94_RS13480 WP_011913747.1 2858795..2861020(-) (comA) [Stutzerimonas stutzeri strain NRCB010]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGTGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCGTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCCCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGAGACGCATCGGCGCCACG
GGCACGATAAAGGCAGGCGAGCGCCTGACGGCGTCGACGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTGCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCAGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGTTCGTCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGCTTCGAGGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGGTTGCGCTTTCGCCACCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCCCTGGTCACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGTGCTGGTGGATGGCGCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGACTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACATTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGACGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCATGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTACTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTTGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGACCCTTGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

3D structure

• AlphaFold DB: A4VMT8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.807	96.356	0.644
comA	Ralstonia pseudosolanacearum GMI1000	36.903	100	0.386