Detailed information NTG0696549

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NDN18_RS01530
• Genome accession: NZ_CP098521
• Coordinates: 319427..320485 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain Cl107
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 314427..325485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN18_RS01515 (NDN18_01515)	-	315533..315865 (+)	333	WP_000169599.1	hypothetical protein	-
NDN18_RS01520 (NDN18_01520)	-	315868..316692 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
NDN18_RS01525 (NDN18_01525)	ponA	316710..319265 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
NDN18_RS01530 (NDN18_01530)	pilM	319427..320485 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
NDN18_RS01535 (NDN18_01535)	pilN	320485..321126 (+)	642	WP_000201221.1	PilN domain-containing protein	Machinery gene
NDN18_RS01540 (NDN18_01540)	pilO	321123..321863 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
NDN18_RS01545 (NDN18_01545)	pilP	321874..322401 (+)	528	WP_000695061.1	pilus assembly protein PilP	Machinery gene
NDN18_RS01550 (NDN18_01550)	pilQ	322464..324629 (+)	2166	WP_001017029.1	type IV pilus secretin PilQ family protein	Machinery gene
NDN18_RS01555 (NDN18_01555)	aroK	324641..325210 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=696549 NDN18_RS01530 WP_002014066.1 319427..320485(+) (pilM) [Acinetobacter baumannii strain Cl107]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=696549 NDN18_RS01530 WP_002014066.1 319427..320485(+) (pilM) [Acinetobacter baumannii strain Cl107]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGACTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTATCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423