Detailed information NTG0696167

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NDN13_RS15700
• Genome accession: NZ_CP098480
• Coordinates: 3287729..3289216 (-)
• Length: 495 a.a.
• NCBI ID: WP_251118250.1
• Uniprot ID: -
• Organism: Acinetobacter sp. C32I
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3282729..3294216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN13_RS15680 (NDN13_15675)	-	3282836..3284110 (-)	1275	WP_065344198.1	OprD family outer membrane porin	-
NDN13_RS15685 (NDN13_15680)	-	3284851..3285621 (+)	771	WP_251116125.1	TorF family putative porin	-
NDN13_RS15690 (NDN13_15685)	-	3285726..3286490 (-)	765	WP_251116126.1	TSUP family transporter	-
NDN13_RS15695 (NDN13_15690)	-	3286899..3287687 (+)	789	WP_251116127.1	TorF family putative porin	-
NDN13_RS15700 (NDN13_15695)	comM	3287729..3289216 (-)	1488	WP_251118250.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NDN13_RS15705 (NDN13_15700)	-	3289286..3289513 (-)	228	WP_004656380.1	accessory factor UbiK family protein	-
NDN13_RS15710 (NDN13_15705)	glnK	3289789..3290127 (+)	339	WP_004656379.1	P-II family nitrogen regulator	-
NDN13_RS15715 (NDN13_15710)	-	3290195..3291604 (+)	1410	WP_251116128.1	ammonium transporter	-
NDN13_RS15720 (NDN13_15715)	nrdR	3291730..3292194 (+)	465	WP_004656377.1	transcriptional regulator NrdR	-
NDN13_RS15725 (NDN13_15720)	ribD	3292207..3293307 (+)	1101	WP_251116129.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 54217.85 Da
• Isoelectric Point: 7.3887

>NTDB_id=696167 NDN13_RS15700 WP_251118250.1 3287729..3289216(-) (comM) [Acinetobacter sp. C32I]
MSFAKIYTRGLLGLHAPQIEVEVHISSGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQFPTKRLTINLAPADLPKDGSR
LDLPIALGILIASGQLAENSTEGFEFIGELALDGHLRPISGALTIAMACQQAQHRLLLPTANLDEANQLPEFEVYAANHL
QAVCAHFSGNYQIQAAPQRTTAAASYYQFDLADVKGQLRPRRALEIAAAGGHSLLFKGPPGTGKTLLASRLPSILPPLNA
RENLEVASIYSVANAPHTFGQRPFRAPHHTASAIALVGGGSQPKPGEITLAHLGVLFLDELPEFDRKVLEVLRQPLESKE
IVISRAARQMTFPANFQFIAAMNPCPCGYAFNQDSRCQCSPDSIQRYQNRISGPLLDRIDLHIDVPPLQAQELQDRSPTE
NSDTVRQRVIHAYEKQIQRQHCLNQALSPKLLEQHALLDDSSTKIIEMAQQRLNLSARAYHRVLRVARTIADLAESELIS
SSHITEALSYRGQQS

Nucleotide

• Length: 1488 bp

>NTDB_id=696167 NDN13_RS15700 WP_251118250.1 3287729..3289216(-) (comM) [Acinetobacter sp. C32I]
ATGTCTTTTGCCAAGATTTATACACGAGGCTTATTGGGGCTACATGCCCCGCAAATTGAAGTTGAAGTCCACATCAGTTC
CGGCTTGCCTTCACTCACAATTGTCGGTTTACCCGAAGCAGCAGTACGCGAAAGTAAAGATCGTGTCCGTTCAGCCATCA
TTAATAGCGGTTTTCAGTTTCCAACCAAGCGCTTAACCATTAATTTAGCACCTGCAGATTTACCTAAAGATGGTTCCAGA
CTCGACTTACCGATTGCGCTCGGTATTCTGATTGCATCAGGTCAATTAGCCGAAAACAGCACTGAAGGTTTTGAATTTAT
TGGGGAACTGGCATTGGATGGACACTTGCGTCCCATTTCAGGAGCCTTAACCATTGCGATGGCCTGCCAACAGGCACAAC
ATCGCTTATTACTGCCGACTGCAAATTTGGATGAAGCCAATCAGTTGCCAGAATTTGAAGTCTATGCAGCCAATCATCTA
CAAGCAGTTTGTGCACATTTTTCGGGCAATTACCAGATTCAAGCTGCACCACAAAGAACAACCGCGGCCGCCTCCTATTA
TCAATTTGATCTTGCCGATGTAAAAGGACAGCTCCGCCCGCGTCGTGCTTTGGAAATTGCTGCCGCAGGTGGGCACTCTT
TATTATTTAAAGGACCGCCTGGCACTGGAAAGACCCTGTTGGCTTCACGGCTGCCCTCTATTTTGCCTCCGCTAAATGCA
CGTGAGAATCTTGAAGTCGCCAGTATCTACTCGGTTGCCAATGCACCCCATACGTTTGGACAACGACCTTTCCGAGCCCC
GCACCATACTGCATCCGCAATTGCTTTGGTGGGCGGTGGTTCTCAACCAAAACCCGGCGAGATCACCTTAGCGCATTTAG
GGGTGCTATTTTTGGATGAACTGCCCGAATTTGATCGCAAAGTACTGGAAGTCCTACGCCAACCACTGGAATCCAAAGAG
ATCGTGATTTCACGTGCAGCACGACAAATGACGTTCCCTGCAAACTTTCAGTTTATTGCAGCAATGAACCCCTGCCCATG
TGGTTATGCCTTTAATCAGGATAGCCGTTGCCAATGTTCGCCAGACAGCATTCAACGTTATCAAAATCGAATTTCAGGGC
CTTTATTAGACCGTATTGATTTGCACATTGATGTGCCGCCCTTACAGGCACAAGAATTACAGGATCGAAGCCCAACCGAA
AACTCTGACACGGTACGACAACGCGTCATCCATGCGTATGAAAAACAAATCCAAAGACAACATTGTTTAAATCAGGCGCT
CTCTCCCAAATTATTGGAACAGCATGCCTTGTTAGATGACAGCTCAACCAAAATCATTGAAATGGCACAACAGCGACTCA
ACCTTTCTGCTCGTGCCTATCATCGAGTGTTAAGAGTGGCTCGAACCATTGCAGATCTAGCCGAAAGCGAACTCATCAGT
AGCAGCCATATCACTGAAGCCTTGTCCTATCGCGGTCAGCAAAGCTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	50.905	100	0.511
comM	Vibrio campbellii strain DS40M4	50.101	100	0.503
comM	Glaesserella parasuis strain SC1401	49.699	100	0.501
comM	Haemophilus influenzae Rd KW20	49.098	100	0.495
comM	Legionella pneumophila str. Paris	48.387	100	0.485
comM	Legionella pneumophila strain ERS1305867	48.387	100	0.485
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.23	100	0.471