Detailed information NTG0696133

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NDN12_RS16860
• Genome accession: NZ_CP098479
• Coordinates: 3682324..3683811 (+)
• Length: 495 a.a.
• NCBI ID: WP_251111562.1
• Uniprot ID: -
• Organism: Acinetobacter sp. C26G
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3677324..3688811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN12_RS16835 (NDN12_16830)	ribD	3678233..3679333 (-)	1101	WP_251110280.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	-
NDN12_RS16840 (NDN12_16835)	nrdR	3679346..3679810 (-)	465	WP_167250178.1	transcriptional regulator NrdR	-
NDN12_RS16845 (NDN12_16840)	-	3679938..3681344 (-)	1407	WP_251110281.1	ammonium transporter	-
NDN12_RS16850 (NDN12_16845)	glnK	3681413..3681751 (-)	339	WP_004656379.1	P-II family nitrogen regulator	-
NDN12_RS16855 (NDN12_16850)	-	3682027..3682254 (+)	228	WP_167250174.1	accessory factor UbiK family protein	-
NDN12_RS16860 (NDN12_16855)	comM	3682324..3683811 (+)	1488	WP_251111562.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
NDN12_RS16865 (NDN12_16860)	-	3683853..3684641 (-)	789	WP_251110282.1	TorF family putative porin	-
NDN12_RS16870 (NDN12_16865)	-	3685047..3685811 (+)	765	WP_251110283.1	TSUP family transporter	-
NDN12_RS16875 (NDN12_16870)	-	3685895..3686668 (-)	774	WP_251110284.1	TorF family putative porin	-
NDN12_RS16880 (NDN12_16875)	-	3687409..3688755 (+)	1347	WP_167250166.1	OprD family outer membrane porin	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 54283.92 Da
• Isoelectric Point: 7.9963

>NTDB_id=696133 NDN12_RS16860 WP_251111562.1 3682324..3683811(+) (comM) [Acinetobacter sp. C26G]
MSFAKIYTRGLLGLHAPQIEVEVHISSGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQFPTKRLTINLAPADLPKDGSR
LDLPIALGILIASGQLPENSTEGFEFIGELALDGHLRPISGALTIAMACQHAQHRLLLPTANLDEANQLPNFEVYAANHL
QEVCAHFSGNSQIQAAPQRITAAASYYQFDLADVKGQLRPRRALEIAAAGGHSLLFKGPPGTGKTLLASRLPSILPPLNA
RENLEVASIYSVANAQHTFGQRPFRAPHHTASAIALVGGGSQPKPGEITLAHLGVLFLDELPEFDRKVLEVLRQPLESKE
IVISRAARQMTFPANFQFIAAMNPCPCGYAFNQDSRCQCSAESIQRYQNRISGPLLDRIDLHIDVPPLQAQELQDRTPTE
NSDTVRQRVIHAYEKQIQRQQCLNQALSPKLLEQHASLDNSSTKIIEMAQQRLNLSARAYHRVLRVARTIADLAQSESIS
SQHITEALSYRGQQK

Nucleotide

• Length: 1488 bp

>NTDB_id=696133 NDN12_RS16860 WP_251111562.1 3682324..3683811(+) (comM) [Acinetobacter sp. C26G]
ATGTCTTTTGCCAAGATCTATACGAGAGGCTTATTGGGGCTACATGCCCCGCAAATTGAAGTTGAAGTCCACATTAGTTC
AGGCTTGCCTTCACTCACAATTGTCGGGTTACCCGAAGCTGCAGTACGTGAAAGTAAAGACCGTGTCCGCTCAGCCATCA
TTAATAGCGGTTTTCAGTTTCCAACCAAGCGCTTAACCATTAATTTAGCGCCTGCGGATTTACCTAAAGATGGTTCCAGA
CTCGACTTACCGATTGCGCTCGGTATTCTGATCGCTTCAGGACAGTTACCAGAAAATAGCACTGAAGGCTTTGAATTTAT
TGGTGAACTGGCATTAGATGGACATTTACGCCCCATATCAGGTGCATTGACCATTGCGATGGCTTGTCAACACGCCCAAC
ATCGCTTATTACTACCAACTGCAAATTTAGATGAAGCCAACCAGCTTCCCAATTTTGAAGTCTATGCAGCCAATCATCTA
CAAGAGGTTTGTGCACATTTTTCGGGCAATTCCCAGATTCAAGCTGCACCACAAAGAATAACCGCAGCCGCCTCCTATTA
TCAATTCGATCTTGCCGATGTAAAAGGACAACTTCGCCCACGTCGTGCTTTGGAAATTGCTGCCGCCGGTGGGCACTCAT
TATTGTTTAAAGGGCCCCCAGGGACTGGAAAAACACTGTTGGCTTCACGCCTTCCTTCTATTTTGCCCCCTTTGAATGCA
CGCGAAAACTTAGAAGTTGCAAGTATTTATTCGGTTGCTAACGCACAACATACTTTTGGACAAAGACCATTTAGAGCACC
ACACCATACCGCATCTGCAATTGCTTTGGTTGGCGGTGGTTCCCAGCCCAAACCTGGTGAAATCACCTTGGCGCATTTAG
GTGTTTTATTTTTGGATGAGTTGCCTGAGTTTGACCGAAAAGTCCTCGAAGTCTTACGTCAACCACTGGAGTCCAAAGAG
ATTGTGATTTCACGAGCAGCACGGCAAATGACCTTTCCTGCAAATTTTCAATTTATTGCCGCAATGAATCCTTGTCCTTG
TGGTTATGCTTTTAATCAAGATAGCCGCTGCCAATGTTCAGCAGAAAGCATTCAGCGTTATCAAAATCGAATTTCTGGTC
CTTTATTAGATCGTATTGATTTGCACATTGATGTACCGCCCTTACAGGCACAAGAATTACAGGATCGAACCCCAACCGAA
AACTCTGACACGGTACGACAACGGGTTATCCATGCTTATGAAAAACAGATCCAAAGACAACAGTGTTTAAATCAGGCACT
CTCACCCAAATTATTAGAACAGCATGCTTCGTTAGATAACAGCTCGACGAAAATTATTGAAATGGCACAACAGCGGCTCA
ACCTTTCTGCTCGTGCCTATCATCGGGTGTTAAGAGTGGCTCGAACCATTGCAGATTTAGCTCAGAGTGAGTCAATCAGT
AGTCAACATATTACTGAAGCATTGTCCTATCGCGGCCAGCAAAAATAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-491)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	50.595	100	0.515
comM	Vibrio campbellii strain DS40M4	49.501	100	0.501
comM	Glaesserella parasuis strain SC1401	49.304	100	0.501
comM	Haemophilus influenzae Rd KW20	48.697	100	0.491
comM	Legionella pneumophila str. Paris	48.79	100	0.489
comM	Legionella pneumophila strain ERS1305867	48.79	100	0.489
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.627	100	0.475