Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | EL347_RS06380 | Genome accession | NZ_AP018405 |
| Coordinates | 1278388..1280538 (-) | Length | 716 a.a. |
| NCBI ID | WP_027821502.1 | Uniprot ID | L7ZAH2 |
| Organism | Lactiplantibacillus plantarum strain SN35N | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1280999..1305438 | 1278388..1280538 | flank | 461 |
Gene organization within MGE regions
Location: 1278388..1305438
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL347_RS06380 (SN35N_1228) | comA | 1278388..1280538 (-) | 2151 | WP_027821502.1 | peptide cleavage/export ABC transporter | Regulator |
| EL347_RS06385 (SN35N_1229) | plnE | 1280804..1280974 (+) | 171 | WP_003641985.1 | two-peptide bacteriocin plantaricin EF subunit PlnE | - |
| EL347_RS06390 (SN35N_1230) | plnF | 1280999..1281157 (+) | 159 | WP_003643811.1 | two-peptide bacteriocin plantaricin EF subunit PlnF | - |
| EL347_RS17335 | - | 1281529..1282029 (+) | 501 | WP_225351141.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EL347_RS06400 (SN35N_1232) | - | 1282323..1283066 (-) | 744 | WP_015825122.1 | response regulator transcription factor | - |
| EL347_RS06405 (SN35N_1233) | - | 1283067..1284407 (-) | 1341 | WP_027821504.1 | GHKL domain-containing protein | - |
| EL347_RS17065 (SN35N_1234) | - | 1284425..1284592 (-) | 168 | WP_153302738.1 | hypothetical protein | - |
| EL347_RS06415 (SN35N_1235) | - | 1285185..1285853 (+) | 669 | WP_027821505.1 | hypothetical protein | - |
| EL347_RS06425 (SN35N_1236) | - | 1286436..1286750 (-) | 315 | WP_003646467.1 | hypothetical protein | - |
| EL347_RS06430 (SN35N_1237) | - | 1286784..1286963 (-) | 180 | WP_027821506.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| EL347_RS17340 (SN35N_1238) | - | 1286979..1287152 (-) | 174 | WP_088899882.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| EL347_RS06440 (SN35N_1239) | - | 1287527..1288711 (-) | 1185 | WP_011100995.1 | cation:proton antiporter | - |
| EL347_RS06445 (SN35N_1240) | brnQ | 1288756..1290132 (-) | 1377 | WP_027821507.1 | branched-chain amino acid transport system II carrier protein | - |
| EL347_RS06450 (SN35N_1241) | - | 1290658..1291473 (-) | 816 | WP_003641966.1 | Cof-type HAD-IIB family hydrolase | - |
| EL347_RS06455 (SN35N_1242) | - | 1291633..1292505 (+) | 873 | WP_003643797.1 | AraC family transcriptional regulator | - |
| EL347_RS06460 (SN35N_1243) | - | 1292576..1293367 (+) | 792 | WP_003643796.1 | Cof-type HAD-IIB family hydrolase | - |
| EL347_RS06465 (SN35N_1244) | - | 1293371..1294525 (+) | 1155 | WP_003641963.1 | MFS transporter | - |
| EL347_RS06470 (SN35N_1245) | - | 1294529..1295146 (+) | 618 | WP_027821508.1 | sugar O-acetyltransferase | - |
| EL347_RS06475 (SN35N_1246) | - | 1295482..1295874 (-) | 393 | WP_228403034.1 | barstar family protein | - |
| EL347_RS06480 (SN35N_1247) | - | 1296238..1296657 (-) | 420 | WP_003643792.1 | hypothetical protein | - |
| EL347_RS06490 (SN35N_1249) | - | 1297201..1297476 (-) | 276 | WP_053339242.1 | polymorphic toxin type 28 domain-containing protein | - |
| EL347_RS17710 | - | 1297610..1297813 (-) | 204 | Protein_1224 | hypothetical protein | - |
| EL347_RS06495 (SN35N_1250) | - | 1297868..1298101 (-) | 234 | WP_308705582.1 | hypothetical protein | - |
| EL347_RS06505 (SN35N_1251) | - | 1298509..1298895 (-) | 387 | WP_003646453.1 | hypothetical protein | - |
| EL347_RS06510 | - | 1298913..1299152 (-) | 240 | WP_003646452.1 | hypothetical protein | - |
| EL347_RS06515 (SN35N_1253) | - | 1299277..1299480 (-) | 204 | WP_003643788.1 | hypothetical protein | - |
| EL347_RS06520 (SN35N_1254) | - | 1299597..1299860 (-) | 264 | WP_053339240.1 | hypothetical protein | - |
| EL347_RS06525 | - | 1300013..1300944 (+) | 932 | Protein_1230 | IS30 family transposase | - |
| EL347_RS06535 (SN35N_1256) | - | 1301488..1301880 (-) | 393 | WP_053339239.1 | hypothetical protein | - |
| EL347_RS17070 | - | 1302009..1302233 (-) | 225 | WP_157485085.1 | hypothetical protein | - |
| EL347_RS17715 (SN35N_1258) | - | 1302275..1302520 (+) | 246 | WP_053339238.1 | hypothetical protein | - |
| EL347_RS06545 (SN35N_1259) | - | 1302659..1302937 (-) | 279 | WP_053339237.1 | hypothetical protein | - |
| EL347_RS06550 (SN35N_1260) | - | 1303055..1303585 (-) | 531 | WP_232525633.1 | hypothetical protein | - |
| EL347_RS06555 (SN35N_1262) | - | 1303916..1305438 (-) | 1523 | Protein_1236 | pre-toxin TG domain-containing protein | - |
Sequence
Protein
Download Length: 716 a.a. Molecular weight: 79956.67 Da Isoelectric Point: 6.6530
>NTDB_id=69561 EL347_RS06380 WP_027821502.1 1278388..1280538(-) (comA) [Lactiplantibacillus plantarum strain SN35N]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVMLNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVMLNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS
Nucleotide
Download Length: 2151 bp
>NTDB_id=69561 EL347_RS06380 WP_027821502.1 1278388..1280538(-) (comA) [Lactiplantibacillus plantarum strain SN35N]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTGTTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAGC
CGAATAGTGGTGATGTCATGCTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACAGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCTCCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAGAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGCTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTGTTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAGC
CGAATAGTGGTGATGTCATGCTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACAGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCTCCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAGAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGCTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus mitis NCTC 12261 |
59.046 |
99.581 |
0.588 |
| comA | Streptococcus pneumoniae Rx1 |
58.766 |
99.581 |
0.585 |
| comA | Streptococcus pneumoniae D39 |
58.766 |
99.581 |
0.585 |
| comA | Streptococcus pneumoniae R6 |
58.766 |
99.581 |
0.585 |
| comA | Streptococcus pneumoniae TIGR4 |
58.626 |
99.581 |
0.584 |
| comA | Streptococcus mitis SK321 |
58.485 |
99.581 |
0.582 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
57.242 |
100 |
0.574 |
| comA/nlmT | Streptococcus mutans UA159 |
54.735 |
100 |
0.549 |