Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   M9H69_RS06110 Genome accession   NZ_CP097843
Coordinates   1186771..1187727 (-) Length   318 a.a.
NCBI ID   WP_250315079.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1181771..1192727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS06090 (M9H69_06090) - 1181814..1183037 (-) 1224 WP_061598515.1 FtsW/RodA/SpoVE family cell cycle protein -
  M9H69_RS06095 (M9H69_06095) prsA 1183226..1184167 (-) 942 WP_000727162.1 peptidylprolyl isomerase PrsA -
  M9H69_RS06100 (M9H69_06100) - 1184235..1184948 (-) 714 WP_000230405.1 O-methyltransferase -
  M9H69_RS06105 (M9H69_06105) pepF 1184950..1186752 (-) 1803 WP_250315078.1 oligoendopeptidase F Regulator
  M9H69_RS06110 (M9H69_06110) coiA 1186771..1187727 (-) 957 WP_250315079.1 competence protein CoiA family protein Machinery gene
  M9H69_RS06115 (M9H69_06115) - 1187804..1188952 (-) 1149 WP_250315080.1 DUF1887 family CARF protein -
  M9H69_RS06120 (M9H69_06120) tehB 1189127..1189987 (-) 861 WP_250315082.1 SAM-dependent methyltransferase TehB -
  M9H69_RS06125 (M9H69_06125) smpB 1190002..1190469 (-) 468 WP_001051742.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 37779.27 Da        Isoelectric Point: 9.3036

>NTDB_id=692930 M9H69_RS06110 WP_250315079.1 1186771..1187727(-) (coiA) [Streptococcus oralis strain HP01]
MFVARDAQGKLVNALEKDVSKQAYTCPACGGGLRLRQGQSIRTHFAHERLRDCIAIFENESPEHLGNKEALYHWAKKDNQ
VALEYSLPEIQQIADVLVNEKLALEVQCSPLSQKLLGDRSQGYRSHGYQVIWLLGEKLWLKERLTQLQRGFLYFSQNMGF
YAWELDFKKQVLRLKYLLHQDLRGKLHFQVKEFPFSQGNLLEILRFPYQKQKLTRITVSQDPTICHYIRQQLYYQTPYWM
KKQEEAYHQGDNLLNRQLDDWYPQVKPIESGDFLQIETDLTSYYRNFQAYYQKKPKNNCQKLYPPAFYHLYFSKNVVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=692930 M9H69_RS06110 WP_250315079.1 1186771..1187727(-) (coiA) [Streptococcus oralis strain HP01]
ATGTTTGTAGCCAGAGATGCACAGGGGAAATTGGTGAATGCCCTCGAAAAAGATGTTAGCAAGCAAGCTTATACTTGTCC
AGCCTGTGGTGGTGGACTACGATTACGTCAGGGACAGAGTATTCGAACGCACTTTGCCCATGAAAGGTTAAGAGATTGTA
TTGCCATTTTTGAAAATGAAAGTCCAGAACACTTGGGCAATAAAGAGGCCCTCTATCACTGGGCCAAGAAGGACAATCAA
GTCGCCTTAGAATATAGTCTGCCCGAGATTCAGCAGATTGCGGATGTTCTCGTCAATGAGAAATTAGCTCTGGAGGTTCA
GTGCAGTCCCTTGTCTCAAAAGCTTTTAGGCGATAGAAGTCAAGGCTACCGTAGTCATGGTTATCAGGTTATCTGGCTAC
TGGGAGAAAAACTCTGGTTAAAAGAGCGATTAACACAACTGCAAAGGGGATTCCTCTATTTTAGTCAAAATATGGGTTTC
TATGCTTGGGAACTAGATTTCAAAAAGCAAGTTTTGAGACTGAAATATCTTTTACATCAGGACCTACGTGGTAAGCTTCA
TTTTCAGGTAAAGGAATTTCCCTTTAGTCAAGGAAACCTCTTGGAAATTCTACGCTTTCCTTATCAAAAACAAAAGCTAA
CTCGTATCACAGTTTCTCAAGATCCAACTATCTGTCACTACATTCGCCAACAATTGTACTACCAAACGCCTTACTGGATG
AAGAAGCAAGAAGAGGCCTATCACCAAGGAGACAATCTATTAAACCGTCAACTAGACGACTGGTATCCTCAAGTCAAGCC
GATAGAATCAGGTGATTTTTTGCAGATTGAAACGGATTTGACTAGCTATTATAGAAATTTTCAGGCTTACTATCAAAAAA
AACCGAAAAATAATTGCCAAAAGCTCTATCCACCAGCCTTTTATCACTTATATTTCTCAAAAAATGTGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae Rx1

69.811

100

0.698
  coiA Streptococcus pneumoniae D39

69.811

100

0.698
  coiA Streptococcus pneumoniae R6

69.811

100

0.698
  coiA Streptococcus mitis NCTC 12261

69.811

100

0.698
  coiA Streptococcus pneumoniae TIGR4

69.497

100

0.695
  coiA Lactococcus lactis subsp. cremoris KW2

42.284

100

0.431