Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   M9H69_RS06105 Genome accession   NZ_CP097843
Coordinates   1184950..1186752 (-) Length   600 a.a.
NCBI ID   WP_250315078.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179950..1191752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS06090 (M9H69_06090) - 1181814..1183037 (-) 1224 WP_061598515.1 FtsW/RodA/SpoVE family cell cycle protein -
  M9H69_RS06095 (M9H69_06095) prsA 1183226..1184167 (-) 942 WP_000727162.1 peptidylprolyl isomerase PrsA -
  M9H69_RS06100 (M9H69_06100) - 1184235..1184948 (-) 714 WP_000230405.1 O-methyltransferase -
  M9H69_RS06105 (M9H69_06105) pepF 1184950..1186752 (-) 1803 WP_250315078.1 oligoendopeptidase F Regulator
  M9H69_RS06110 (M9H69_06110) coiA 1186771..1187727 (-) 957 WP_250315079.1 competence protein CoiA family protein Machinery gene
  M9H69_RS06115 (M9H69_06115) - 1187804..1188952 (-) 1149 WP_250315080.1 DUF1887 family CARF protein -
  M9H69_RS06120 (M9H69_06120) tehB 1189127..1189987 (-) 861 WP_250315082.1 SAM-dependent methyltransferase TehB -
  M9H69_RS06125 (M9H69_06125) smpB 1190002..1190469 (-) 468 WP_001051742.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69840.76 Da        Isoelectric Point: 4.5587

>NTDB_id=692929 M9H69_RS06105 WP_250315078.1 1184950..1186752(-) (pepF) [Streptococcus oralis strain HP01]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEISEEQYAAFLEAQPKLQVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGAASETFAILDNADITFPYVLDDEGNEVQLSHGTYIRLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLELRSKILGISDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGEDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDVTRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPEIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=692929 M9H69_RS06105 WP_250315078.1 1184950..1186752(-) (pepF) [Streptococcus oralis strain HP01]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCAACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCAGTATGAGGGACATCTCTTGGACAGCGCAGACAGTT
TGCTTGAGATCACAGAATTCTCACTCGACTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCGCATATGAAAAATGAC
CAAGACACTCGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGTGAGGAGCAGTATGCGGCCTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAGCACTTTTTTGACAAGCTCTTGCAAAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTACTTGCTGGAGCA
GGAGAAATCTTTGGCGCTGCTAGTGAAACTTTCGCTATTTTGGACAATGCAGATATCACCTTCCCATACGTCTTGGATGA
TGAAGGTAATGAAGTGCAACTCTCACACGGTACTTACATCCGTTTGATGGAGTCTAAAAACCGTGAAGTACGTCGTGGTG
CCTATGAAGCCCTCTATGCGACTTACGAGCAATTCCAACACACTTATGCTAAGACTTTGCAGACAAATGTTAAGGTGCAA
AACTACCGTGCCAAAGTTCGCAACTATAAGAGCGCTCGCCATGCAGCCCTCGCAGCAAACTTTGTTCCAGAAAGTGTCTA
TGACAATTTGGTAGCAGCAGTTCGCAAGCATTTGCCACTTTTGCATCGTTACCTCGAGCTTCGTTCTAAAATCTTGGGGA
TTTCTGATCTCAAGATGTACGATGTCTACACACCGCTATCTTCAGTAGAATACAGCTTTACCTACGAAGAAGCCTTGAAG
AAAGCAGAAGAAGCCTTGGCAGTCTTGGGTGAGGATTACTTGAGCCGTGTCAAACGTGCCTTTAGCGAGCGTTGGATTGA
TGTCTATGAAAATCAAGGCAAGCGTTCAGGTGCCTATTCTGGTGGTTCCTATGACACCAATGCCTTTATGCTTCTCAACT
GGCAGGACAATTTAGACAATCTCTTTACCCTTGTCCATGAAACAGGTCACAGTATGCATTCAAGCTATACTCGTGAAACT
CAGCCTTATGTTTACGGAGATTACTCTATCTTCTTGGCGGAGATTGCCTCAACGACCAACGAAAATATCTTGACGGAGAA
ATTATTGGAAGAAGTAGAAGACGATGTAACTCGCTTTGCTATCCTCAATAACTTCCTAGACGGTTTCCGTGGAACAGTCT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCACCAAGCAGATCAAAACGGTGAAGTCTTGACAAGTGATTTC
CTCAATAAACTCTATGCCGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAGGACAATCCTGAAATTCAGTACGAATG
GGCGCGCATTCCACACTTCTACTATAACTACTATGTATACCAGTATTCGACTGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGTAGTCAAGAAGATCGTGACCGCTATATCGACTACCTCAAGGCAGGTAAATCAGACTATCCACTC
AATGTCATGAGAAAAGCTGGTGTTGATATGGAAAAAGAAGACTATCTTAATGATGCCTTTGCAGTCTTTGAACGTCGCTT
GAACGAGTTTGAAGCTCTTGTTGAAAAATTGGGACTAGCTTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.953

99.333

0.675