Detailed information NTG0689855

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: OTU47_RS12065
• Genome accession: NZ_CP113115
• Coordinates: 2193419..2193880 (+)
• Length: 153 a.a.
• NCBI ID: WP_309543754.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NP2
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 2188419..2198880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTU47_RS11455 (OTU47_11455)	blpN	2188724..2188927 (-)	204	WP_001099492.1	two-peptide bacteriocin subunit BlpN	-
OTU47_RS11460 (OTU47_11460)	blpM	2188943..2189197 (-)	255	WP_000379879.1	two-peptide bacteriocin subunit BlpM	-
OTU47_RS11465 (OTU47_11465)	-	2189347..2190152 (-)	806	Protein_2227	IS5 family transposase	-
OTU47_RS11470 (OTU47_11470)	-	2190355..2190759 (-)	405	WP_000846944.1	hypothetical protein	-
OTU47_RS11475 (OTU47_11475)	-	2190756..2190920 (-)	165	WP_000727118.1	hypothetical protein	-
OTU47_RS11480 (OTU47_11480)	-	2191219..2191338 (-)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
OTU47_RS11485 (OTU47_11485)	blpU	2191341..2191571 (-)	231	WP_000379967.1	bacteriocin-like peptide BlpU	-
OTU47_RS11490 (OTU47_11490)	blpJ	2191640..2191909 (-)	270	WP_001093248.1	bacteriocin-like peptide BlpJ	-
OTU47_RS11495 (OTU47_11495)	blpI	2192376..2192573 (-)	198	WP_001093259.1	bacteriocin-like peptide BlpI	-
OTU47_RS12060	comA/nlmT	2192887..2193474 (+)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
OTU47_RS12065	comA/nlmT	2193419..2193880 (+)	462	WP_309543754.1	ABC transporter transmembrane domain-containing protein	Regulator
OTU47_RS11505 (OTU47_11505)	-	2194133..2195086 (+)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-
OTU47_RS11510 (OTU47_11510)	blpA	2195107..2196285 (+)	1179	Protein_2237	peptide cleavage/export ABC transporter BlpA	-
OTU47_RS11515 (OTU47_11515)	-	2196296..2197657 (+)	1362	WP_267750037.1	bacteriocin secretion accessory protein	-
OTU47_RS11520 (OTU47_11520)	blpC	2197714..2197842 (+)	129	WP_000358815.1	quorum-sensing system pheromone BlpC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17224.55 Da
• Isoelectric Point: 5.7319

>NTDB_id=689855 OTU47_RS12065 WP_309543754.1 2193419..2193880(+) (comA/nlmT) [Streptococcus pneumoniae strain NP2]
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLLSIPIYMFIIFSFMKPF

Nucleotide

• Length: 462 bp

>NTDB_id=689855 OTU47_RS12065 WP_309543754.1 2193419..2193880(+) (comA/nlmT) [Streptococcus pneumoniae strain NP2]
TTGGTCACTATTATCAATATCGGTGGTTCTTATTATCTCCAAGGAATCTTGGATGAATACATCCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCTTTTCCAGAGATTATCTCC
TAACCGTTCTGAGCCAGAGATTAAGCATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGGAGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTCC
TTTCTCTTCTTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAACCTTTTTGA

Domains

Predicted by InterProScan.

• ABC transporter transmembrane region (ABC_membrane) (3-151)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	75.817	100	0.758
comA	Streptococcus mitis SK321	72.549	100	0.725
comA	Streptococcus pneumoniae Rx1	72.549	100	0.725
comA	Streptococcus pneumoniae D39	72.549	100	0.725
comA	Streptococcus pneumoniae R6	72.549	100	0.725
comA	Streptococcus mitis NCTC 12261	72.549	100	0.725
comA	Streptococcus pneumoniae TIGR4	71.895	100	0.719
comA	Streptococcus gordonii str. Challis substr. CH1	70.588	100	0.706