Detailed information NTG0689778

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: OTU47_RS03760
• Genome accession: NZ_CP113115
• Coordinates: 712500..712904 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NP2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 707500..717904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTU47_RS03720 (OTU47_03720)	-	709493..709609 (+)	117	WP_001063632.1	hypothetical protein	-
OTU47_RS03725 (OTU47_03725)	-	709590..709793 (+)	204	WP_001091107.1	hypothetical protein	-
OTU47_RS03730 (OTU47_03730)	-	709796..710146 (+)	351	WP_054368148.1	hypothetical protein	-
OTU47_RS03735 (OTU47_03735)	-	710156..710455 (+)	300	WP_001811580.1	hypothetical protein	-
OTU47_RS03740 (OTU47_03740)	-	710459..710794 (+)	336	WP_001186204.1	phage holin	-
OTU47_RS03745 (OTU47_03745)	lytA	710794..711750 (+)	957	WP_054436120.1	N-acetylmuramoyl-L-alanine amidase LytA	-
OTU47_RS03750 (OTU47_03750)	-	711982..712239 (+)	258	WP_000698513.1	hypothetical protein	-
OTU47_RS03755 (OTU47_03755)	comGC/cglC	712241..712507 (+)	267	WP_050073122.1	competence type IV pilus major pilin ComGC	Machinery gene
OTU47_RS03760 (OTU47_03760)	comGD/cglD	712500..712904 (+)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
OTU47_RS03765 (OTU47_03765)	comGE/cglE	712867..713169 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
OTU47_RS03770 (OTU47_03770)	comGF/cglF	713132..713593 (+)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
OTU47_RS03775 (OTU47_03775)	comGG/cglG	713571..713984 (+)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
OTU47_RS03780 (OTU47_03780)	-	714121..714715 (+)	595	Protein_727	class I SAM-dependent methyltransferase	-
OTU47_RS03785 (OTU47_03785)	comGH	714776..715729 (+)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
OTU47_RS03790 (OTU47_03790)	-	715780..716970 (+)	1191	WP_000167766.1	acetate kinase	-
OTU47_RS03795 (OTU47_03795)	-	716971..717102 (+)	132	WP_000768904.1	hypothetical protein	-
OTU47_RS03800 (OTU47_03800)	rnpA	717119..717490 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=689778 OTU47_RS03760 WP_000588013.1 712500..712904(+) (comGD/cglD) [Streptococcus pneumoniae strain NP2]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=689778 OTU47_RS03760 WP_000588013.1 712500..712904(+) (comGD/cglD) [Streptococcus pneumoniae strain NP2]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comGD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comGD	Streptococcus mutans UA140	49.219	95.522	0.47
comGD	Streptococcus mutans UA159	49.219	95.522	0.47