Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | CDC37_RS08895 | Genome accession | NZ_AP018254 |
| Coordinates | 2263803..2263970 (-) | Length | 55 a.a. |
| NCBI ID | WP_330220838.1 | Uniprot ID | - |
| Organism | Calothrix sp. NIES-3974 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2258803..2268970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDC37_RS08875 (NIES3974_18210) | - | 2259345..2259638 (-) | 294 | WP_096621432.1 | CTB family bacteriocin | - |
| CDC37_RS08880 (NIES3974_18220) | - | 2259808..2260689 (-) | 882 | WP_231943336.1 | metallophosphoesterase | - |
| CDC37_RS08885 (NIES3974_18230) | der | 2261322..2262683 (+) | 1362 | WP_096621433.1 | ribosome biogenesis GTPase Der | - |
| CDC37_RS08890 (NIES3974_18240) | - | 2262718..2263659 (+) | 942 | WP_096621434.1 | CbiQ family ECF transporter T component | - |
| CDC37_RS08895 | rcrQ | 2263803..2263970 (-) | 168 | WP_330220838.1 | hypothetical protein | Regulator |
| CDC37_RS08900 (NIES3974_18250) | nadC | 2264023..2264892 (-) | 870 | WP_096621436.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| CDC37_RS08905 (NIES3974_18260) | - | 2265099..2265638 (+) | 540 | WP_096621437.1 | DUF2267 domain-containing protein | - |
| CDC37_RS08910 (NIES3974_18270) | - | 2265748..2266137 (-) | 390 | WP_096621438.1 | hypothetical protein | - |
| CDC37_RS08915 (NIES3974_18280) | - | 2266260..2267849 (-) | 1590 | WP_096621439.1 | FAD-dependent oxidoreductase | - |
| CDC37_RS08920 (NIES3974_18290) | - | 2267954..2268490 (-) | 537 | WP_231943338.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 55 a.a. Molecular weight: 6091.12 Da Isoelectric Point: 6.7170
>NTDB_id=68912 CDC37_RS08895 WP_330220838.1 2263803..2263970(-) (rcrQ) [Calothrix sp. NIES-3974]
MVIAHRLSTIQNADMIVVVEQGRIVETGTHVELIALGGRYAYLHSMQFPQVLGNL
MVIAHRLSTIQNADMIVVVEQGRIVETGTHVELIALGGRYAYLHSMQFPQVLGNL
Nucleotide
Download Length: 168 bp
>NTDB_id=68912 CDC37_RS08895 WP_330220838.1 2263803..2263970(-) (rcrQ) [Calothrix sp. NIES-3974]
TTGGTAATTGCTCACCGCCTTTCCACTATCCAAAATGCCGATATGATCGTGGTGGTGGAGCAGGGGAGAATTGTGGAAAC
GGGAACTCACGTAGAATTAATTGCTCTGGGTGGTAGGTATGCTTATTTACATAGTATGCAGTTTCCACAGGTTTTGGGTA
ATTTGTAA
TTGGTAATTGCTCACCGCCTTTCCACTATCCAAAATGCCGATATGATCGTGGTGGTGGAGCAGGGGAGAATTGTGGAAAC
GGGAACTCACGTAGAATTAATTGCTCTGGGTGGTAGGTATGCTTATTTACATAGTATGCAGTTTCCACAGGTTTTGGGTA
ATTTGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
54 |
90.909 |
0.491 |
| comA/nlmT | Streptococcus mutans UA159 |
52.5 |
72.727 |
0.382 |
| comA | Streptococcus pneumoniae Rx1 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus pneumoniae D39 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus pneumoniae R6 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus pneumoniae TIGR4 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus mitis SK321 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
48.837 |
78.182 |
0.382 |
| comA | Streptococcus mitis NCTC 12261 |
48.837 |
78.182 |
0.382 |