Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   MX657_RS21615 Genome accession   NZ_CP097173
Coordinates   4498690..4500210 (+) Length   506 a.a.
NCBI ID   WP_217480771.1    Uniprot ID   A0AA96M4Q5
Organism   Enterobacter chuandaensis strain E20191216     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 4493690..4505210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX657_RS21590 (MX657_21585) ilvE 4495256..4496185 (-) 930 WP_023326297.1 branched-chain-amino-acid transaminase -
  MX657_RS21595 (MX657_21590) ilvM 4496204..4496467 (-) 264 WP_003860184.1 acetolactate synthase 2 small subunit -
  MX657_RS21600 (MX657_21595) ilvG 4496464..4498110 (-) 1647 WP_119917184.1 acetolactate synthase 2 catalytic subunit -
  MX657_RS21605 (MX657_21600) ilvX 4498113..4498163 (-) 51 WP_166792073.1 peptide IlvX -
  MX657_RS21610 (MX657_21605) ilvL 4498250..4498348 (-) 99 WP_001311244.1 ilv operon leader peptide -
  MX657_RS21615 (MX657_21610) comM 4498690..4500210 (+) 1521 WP_217480771.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  MX657_RS21620 (MX657_21615) - 4500236..4500574 (-) 339 WP_008501577.1 DUF413 domain-containing protein -
  MX657_RS21625 (MX657_21620) hdfR 4500693..4501514 (+) 822 WP_346806764.1 HTH-type transcriptional regulator HdfR -

Sequence

Protein


Download         Length: 506 a.a.        Molecular weight: 55079.11 Da        Isoelectric Point: 7.3597

>NTDB_id=687622 MX657_RS21615 WP_217480771.1 4498690..4500210(+) (comM) [Enterobacter chuandaensis strain E20191216]
MSLSVVYTRAALGVKAPLISVEVHLSNGLPGLTLVGLPETTVKEARDRVRSAIINSGYTFPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLKTNRLGSYEFVGELALTGALRGVPGAISGALEAIRAGRQIIVANENASEVSLIAEKGCLIAGHL
QEVCAWLEGRHELSEPEECDEAIADAPEDLSEIMGQEQGKRALEITAAGGHNLLLIGPPGTGKTMLASRLSGLLPPLNNH
EALESAAIYSLISSTSLHKQWRRRPFRSPHHSASLTAMVGGGSIPGPGEISLAHNGILFLDELPEFERRVLDALREPIES
GEIHISRTRAKISYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLGKLSGPFLDRFDLSLEIPLPPPGLLRQTDRLG
ESSAHVRERVIAAQARQYARQNRLNARLDNAGIRQFCSLNGEDAVWLEETLTRFGLSIRAWQRLLKVARTIADVEGCADI
ERKHLQEALSYRAIDRLLLHLQKLLA

Nucleotide


Download         Length: 1521 bp        

>NTDB_id=687622 MX657_RS21615 WP_217480771.1 4498690..4500210(+) (comM) [Enterobacter chuandaensis strain E20191216]
ATGTCACTGTCAGTTGTTTATACGCGTGCGGCTCTCGGGGTGAAGGCTCCGCTTATTTCCGTAGAGGTTCATTTGAGTAA
TGGGCTGCCAGGACTCACGCTTGTCGGGCTACCGGAAACGACGGTTAAAGAGGCCAGGGATCGCGTTCGCAGCGCAATCA
TAAATAGCGGTTATACCTTCCCCGCGAAGAAGATCACCATCAACCTTGCCCCCGCCGATCTGCCCAAAGAGGGGGGACGA
TATGATTTACCTATCGCGATAGCGCTTCTCGCAGCTTCTGAGCAGCTTAAGACGAACAGGCTAGGCTCGTATGAGTTCGT
GGGTGAACTCGCGCTTACAGGCGCATTAAGAGGCGTTCCCGGTGCGATATCAGGTGCGCTGGAAGCAATACGCGCAGGAC
GGCAAATCATTGTCGCCAATGAAAACGCATCAGAAGTGAGTCTTATTGCAGAGAAGGGATGCCTCATCGCGGGGCATCTT
CAGGAAGTGTGTGCCTGGCTTGAAGGGCGTCATGAACTGTCCGAGCCGGAAGAGTGCGACGAGGCTATAGCGGATGCGCC
AGAAGATCTCAGCGAGATCATGGGACAAGAGCAAGGGAAGCGTGCTCTGGAAATTACGGCAGCGGGTGGGCACAATCTTC
TGCTGATTGGTCCGCCGGGTACGGGCAAAACCATGCTGGCGAGCAGGCTGAGCGGGCTGCTACCACCGCTTAATAACCAT
GAAGCGCTGGAAAGCGCTGCCATTTATAGTCTTATCAGTTCGACGTCGTTGCATAAACAGTGGCGTCGACGTCCCTTTCG
TTCACCGCATCATAGCGCGTCACTGACGGCAATGGTCGGCGGTGGGTCTATTCCGGGGCCGGGAGAGATCTCACTGGCAC
ACAACGGCATTCTGTTTCTCGATGAGCTACCTGAGTTTGAGCGCCGCGTGCTGGATGCACTGAGGGAACCCATTGAATCG
GGTGAGATACATATTTCACGCACGCGAGCCAAAATAAGCTATCCCGCCCGTTTTCAGCTCGTGGCGGCGATGAACCCCAG
CCCGACGGGGCATTATCAGGGCAATCATAACCGCTGTACGCCAGAGCAGACGCTGCGCTATCTGGGAAAACTATCCGGTC
CATTTCTCGACCGTTTCGATTTATCACTGGAAATCCCGCTTCCACCGCCGGGTCTGCTCAGGCAGACGGATAGGCTCGGT
GAAAGCTCCGCGCACGTTCGCGAGCGGGTTATCGCGGCACAGGCGCGACAGTACGCTCGTCAAAACAGGCTTAATGCACG
GCTGGATAATGCCGGGATCCGACAGTTTTGTTCTCTTAACGGTGAAGATGCTGTGTGGCTGGAGGAGACGTTGACGCGCT
TTGGGCTTTCCATACGTGCGTGGCAGCGTTTATTAAAAGTGGCCAGAACCATTGCGGACGTGGAGGGATGTGCCGACATT
GAGAGGAAACACTTGCAGGAGGCGCTGAGCTATCGCGCTATCGATCGTTTGCTGCTGCATCTGCAGAAGTTACTGGCATA
A

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(189-386)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(400-492)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

58.35

100

0.587
  comM Glaesserella parasuis strain SC1401

58.58

100

0.587
  comM Vibrio campbellii strain DS40M4

58.847

99.407

0.585
  comM Vibrio cholerae strain A1552

58.449

99.407

0.581
  comM Legionella pneumophila str. Paris

50.101

98.221

0.492
  comM Legionella pneumophila strain ERS1305867

50.101

98.221

0.492
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.314

100

0.447