Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | JLF69_RS05850 | Genome accession | NZ_AP022549 |
| Coordinates | 1225014..1225529 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain THO-015 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1220014..1230529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF69_RS05805 (THOESC015_11440) | csrA | 1220870..1221055 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| JLF69_RS05835 (THOESC015_11450) | yqaB | 1222244..1222810 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| JLF69_RS05840 (THOESC015_11460) | yqaA | 1222807..1223235 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| JLF69_RS05845 (THOESC015_11470) | gshA | 1223308..1224864 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| JLF69_RS05850 (THOESC015_11480) | luxS | 1225014..1225529 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| JLF69_RS05855 (THOESC015_11490) | - | 1225580..1226692 (-) | 1113 | WP_000638136.1 | ATP-binding protein | - |
| JLF69_RS05860 (THOESC015_11500) | - | 1226689..1227396 (-) | 708 | WP_001097132.1 | RNA ligase family protein | - |
| JLF69_RS05865 (THOESC015_11510) | emrB | 1227654..1229192 (-) | 1539 | WP_001296316.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| JLF69_RS05870 (THOESC015_11520) | emrA | 1229209..1230381 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=68334 JLF69_RS05850 WP_001130208.1 1225014..1225529(+) (luxS) [Escherichia coli strain THO-015]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=68334 JLF69_RS05850 WP_001130208.1 1225014..1225529(+) (luxS) [Escherichia coli strain THO-015]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |