Detailed information NTG0678951

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MYA84_RS06925
• Genome accession: NZ_CP095872
• Coordinates: 1382732..1383910 (+)
• Length: 392 a.a.
• NCBI ID: WP_048881093.1
• Uniprot ID: A0A0J8SV07
• Organism: Acinetobacter schindleri strain H4-3-C1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1377732..1388910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYA84_RS06910 (MYA84_06885)	-	1379069..1380181 (+)	1113	WP_048881095.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
MYA84_RS06915 (MYA84_06890)	-	1380387..1380917 (+)	531	WP_004809525.1	hypothetical protein	-
MYA84_RS06920 (MYA84_06895)	-	1381439..1382488 (+)	1050	WP_048881094.1	3-deoxy-7-phosphoheptulonate synthase	-
MYA84_RS06925 (MYA84_06900)	pilU	1382732..1383910 (+)	1179	WP_048881093.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MYA84_RS06930 (MYA84_06905)	pilU	1384320..1385525 (+)	1206	WP_184104677.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MYA84_RS06935 (MYA84_06910)	-	1385583..1386757 (-)	1175	Protein_1322	MFS transporter	-
MYA84_RS06940 (MYA84_06915)	gcvH	1386988..1387362 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
MYA84_RS06945 (MYA84_06920)	-	1387435..1388463 (-)	1029	WP_076753628.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44520.08 Da
• Isoelectric Point: 6.6647

>NTDB_id=678951 MYA84_RS06925 WP_048881093.1 1382732..1383910(+) (pilU) [Acinetobacter schindleri strain H4-3-C1]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNERQIKEFESVMEC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTEIPSFQQLGLPNSLQQVIMEKRGLVLIVGATGVGKSTTLAAMIDHRNT
YSEGHIITIEDPVEYVYQHKKSMITQREIGVDCVSWHNALINTMRQAPDVIVIGEIRDTESMEHAIAFAESGHLCLATLH
SNNADQALDRIINFFPEERRNQLLMDLSANMKAVISQRLIRTEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGIISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSKMRILEQSKETTLSRN

Nucleotide

• Length: 1179 bp

>NTDB_id=678951 MYA84_RS06925 WP_048881093.1 1382732..1383910(+) (pilU) [Acinetobacter schindleri strain H4-3-C1]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGAGGTTC
CGATCTTTTTATTACCGCAGATTTTCCACCAAGTATCAAACAGCAGGGCTTGATGAAACCTTTTGGTCAGCAAAAACTGG
CAGCGGATAAAACCCGTTTGTTTGCCTATGCTTTAATGAATGAACGACAGATCAAGGAATTTGAATCAGTGATGGAATGC
AATTTCGGTATCAGTGTACCGGGTGTATCACGCTTCCGGGTCAATGTCTTTCAGCAACAGCATAATGTTGGGATGGTAAT
CAGAACCATTACTACGGAGATTCCAAGCTTTCAGCAATTAGGACTACCAAACTCTTTGCAACAAGTGATTATGGAAAAAC
GTGGGCTGGTTCTGATTGTAGGTGCGACAGGTGTTGGTAAATCTACCACACTTGCAGCCATGATTGATCACCGCAATACC
TATTCTGAAGGACATATTATTACCATAGAAGATCCTGTGGAATACGTGTATCAACATAAAAAGTCCATGATTACCCAACG
TGAAATTGGCGTAGATTGTGTTTCCTGGCATAACGCGCTGATCAATACCATGCGTCAGGCACCGGATGTAATCGTGATTG
GTGAAATCCGGGATACTGAAAGTATGGAGCATGCGATTGCCTTTGCTGAATCCGGTCATCTGTGTTTGGCCACCCTGCAT
TCTAATAATGCCGATCAGGCTTTAGATCGAATTATTAATTTCTTTCCGGAAGAACGCCGCAATCAGTTATTAATGGATTT
ATCCGCCAATATGAAAGCTGTGATTTCGCAACGTTTGATCCGTACCGAGGATGGGCAAGGCCGTAGAGCTGCCGTTGAAA
TTTTATTGAATACGCCACTGGTGTCTGATTTTATCCGTAAAGGAGATTTTTACGAGTTGAAAACTATTATGGCGCGTTCG
CGTGAACTCGGCATGCAGACCTTTGATCAGGCATTATTTGATTTGTATAACCAGGGAATTATTTCTTATGACGAAGCCTT
GCGTAATGCAGATTCAAGTAATGAAATGCGTTTGCAGATCAAATTAAAGAGCAGTCGCATCAATCCCGCTCTTCAGGAAG
AAGGAAGTAAAATGAGGATACTGGAACAGTCTAAGGAAACTACACTTTCCAGAAACTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-282)

3D structure

• AlphaFold DB: A0A0J8SV07

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	58.333	88.776	0.518
pilU	Acinetobacter baylyi ADP1	55.367	90.306	0.5
pilU	Vibrio cholerae strain A1552	49.859	90.561	0.452
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	86.48	0.372