Detailed information NTG0678952

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MYA84_RS06930
• Genome accession: NZ_CP095872
• Coordinates: 1384320..1385525 (+)
• Length: 401 a.a.
• NCBI ID: WP_184104677.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain H4-3-C1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1379320..1390525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYA84_RS06915 (MYA84_06890)	-	1380387..1380917 (+)	531	WP_004809525.1	hypothetical protein	-
MYA84_RS06920 (MYA84_06895)	-	1381439..1382488 (+)	1050	WP_048881094.1	3-deoxy-7-phosphoheptulonate synthase	-
MYA84_RS06925 (MYA84_06900)	pilU	1382732..1383910 (+)	1179	WP_048881093.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MYA84_RS06930 (MYA84_06905)	pilU	1384320..1385525 (+)	1206	WP_184104677.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MYA84_RS06935 (MYA84_06910)	-	1385583..1386757 (-)	1175	Protein_1322	MFS transporter	-
MYA84_RS06940 (MYA84_06915)	gcvH	1386988..1387362 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
MYA84_RS06945 (MYA84_06920)	-	1387435..1388463 (-)	1029	WP_076753628.1	AraC family transcriptional regulator	-
MYA84_RS06950 (MYA84_06925)	-	1388616..1389065 (-)	450	WP_004895014.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45257.67 Da
• Isoelectric Point: 6.3946

>NTDB_id=678952 MYA84_RS06930 WP_184104677.1 1384320..1385525(+) (pilU) [Acinetobacter schindleri strain H4-3-C1]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQELTPEKTKLFAYALMNEKQRKEYEAELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDMILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIVSQRLVRTEDGKGRRAAVEIMLNTPLVSDLILKGDFHELKAIMGKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSTRANPAMNNTATAFSMMEEKKPDNETDEDASSTEQS
S

Nucleotide

• Length: 1206 bp

>NTDB_id=678952 MYA84_RS06930 WP_184104677.1 1384320..1385525(+) (pilU) [Acinetobacter schindleri strain H4-3-C1]
ATGTTTACGGCAGAGTTATTAGAAGAAGCACGTAAGTTTATGCATCATATGCTGACCAAGGTCGTTGAATATGGTGGTTC
AGACTTGTTCATTACCGCAGACTTTCCTCCGAGTATCAAACATCAAGGATTAATGAAACCTTTTGGGCAACAGGAACTCA
CCCCAGAAAAAACCAAACTGTTTGCCTATGCACTGATGAACGAAAAGCAGCGTAAAGAATATGAAGCAGAACTAGAATGT
AACTTTGCCATTACTGTACCGGGCGTTTCACGTTTCCGTGTCAACGTGTTCCAGCAGCAGCTCAATGTCGGCATGGTGAT
CCGGACCATCACTGCAGAAATTCCGAATTTCCAGAAGTTAAAATTACCAGAGTCACTCAAGCATGTGATTATGGAAAAGC
GCGGTCTGGTACTCGTCGTGGGCGGTACAGGTTCAGGTAAGTCGACTTCGCTTGCTGCGATGATTGATTATCGTAATGAA
AACTCAGCAGGCCATATCATTACCGTAGAAGACCCGGTGGAATATGTACATAAACATAAGAAGTCAATGATCACCCATCG
CGAGGTCGGGGTAGATAGCCATTCCTGGCATAATGCCTTAAAAAATACCTTGCGTCAGGCACCCGATATGATTCTGATTG
GTGAAATCCGGGATACGGAAACCATGGAACATGCGATTGCCTTTGCCGAGACAGGGCATCTCTGTCTGGGGACACTACAT
TCTAACAATGCCAACCAGACACTGGACCGGATTATTAACTTCTTCCCGGAGGAACGCCGTAATCAGTTATTGATGGATCT
ATCTTCCAATATGAAAGCGATTGTCTCTCAGCGTTTGGTCCGTACTGAAGATGGCAAGGGACGTCGTGCCGCAGTCGAAA
TTATGCTGAATACACCATTGGTATCAGATCTTATTCTGAAAGGTGATTTCCATGAATTAAAAGCAATTATGGGCAAATCA
CGTGAACTTGGTATGCAGACTTTTGATCAGGCATTATTTGATCTTTATAATGAAGGTGCGATTTCTTATGAAGAAGCATT
GCGTAATGCTGATTCGACCAATGAACTTCGTCTGCAAATCAAACTGAAAAGTACGCGTGCTAATCCAGCCATGAATAATA
CGGCCACCGCATTTAGCATGATGGAAGAGAAAAAGCCGGATAATGAAACGGATGAAGATGCCAGTAGTACAGAACAAAGC
TCATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.92	86.783	0.529
pilU	Acinetobacter baylyi ADP1	53.911	89.277	0.481
pilU	Vibrio cholerae strain A1552	51.268	88.529	0.454