Detailed information
Bioinformatically predicted
Overview
| Name | cytR | Type | Regulator |
| Locus tag | JLE49_RS21600 | Genome accession | NZ_AP022409 |
| Coordinates | 4537832..4538857 (+) | Length | 341 a.a. |
| NCBI ID | WP_000644904.1 | Uniprot ID | P0ACN8 |
| Organism | Escherichia coli strain STW0522-31 | ||
| Function | promote competence gene expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4532832..4543857
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLE49_RS21575 (STW0522ESC31_41660) | metJ | 4533393..4533710 (+) | 318 | WP_000852812.1 | met regulon transcriptional regulator MetJ | - |
| JLE49_RS21580 (STW0522ESC31_41670) | yiiX | 4533770..4534378 (+) | 609 | WP_001402675.1 | YiiX family permuted papain-like enzyme | - |
| JLE49_RS21585 (STW0522ESC31_41680) | - | 4534385..4535008 (+) | 624 | WP_001402674.1 | TIGR02117 family protein | - |
| JLE49_RS21590 (STW0522ESC31_41690) | rpmE | 4535063..4535275 (-) | 213 | WP_000710769.1 | 50S ribosomal protein L31 | - |
| JLE49_RS21595 (STW0522ESC31_41700) | priA | 4535478..4537676 (+) | 2199 | WP_001298972.1 | primosomal protein N' | Machinery gene |
| JLE49_RS21600 (STW0522ESC31_41710) | cytR | 4537832..4538857 (+) | 1026 | WP_000644904.1 | DNA-binding transcriptional regulator CytR | Regulator |
| JLE49_RS21605 (STW0522ESC31_41720) | ftsN | 4538949..4539908 (+) | 960 | WP_000068834.1 | cell division protein FtsN | - |
| JLE49_RS21610 (STW0522ESC31_41730) | hslV | 4540001..4540531 (+) | 531 | WP_000208242.1 | ATP-dependent protease subunit HslV | - |
| JLE49_RS21615 (STW0522ESC31_41740) | hslU | 4540541..4541872 (+) | 1332 | WP_001293343.1 | HslU--HslV peptidase ATPase subunit | - |
| JLE49_RS21620 (STW0522ESC31_41750) | menA | 4541939..4542865 (+) | 927 | WP_000139496.1 | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | - |
| JLE49_RS21625 (STW0522ESC31_41760) | rraA | 4542958..4543443 (+) | 486 | WP_000872908.1 | ribonuclease E activity regulator RraA | - |
| JLE49_RS21630 (STW0522ESC31_41770) | zapB | 4543528..4543773 (-) | 246 | WP_001296623.1 | septal ring assembly protein ZapB | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37819.78 Da Isoelectric Point: 6.3842
>NTDB_id=67798 JLE49_RS21600 WP_000644904.1 4537832..4538857(+) (cytR) [Escherichia coli strain STW0522-31]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP
Nucleotide
Download Length: 1026 bp
>NTDB_id=67798 JLE49_RS21600 WP_000644904.1 4537832..4538857(+) (cytR) [Escherichia coli strain STW0522-31]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cytR | Vibrio parahaemolyticus RIMD 2210633 |
64.179 |
98.24 |
0.63 |
| cytR | Vibrio cholerae C6706 |
65.443 |
95.894 |
0.628 |