Detailed information NTG0677956

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: L2Y94_RS06200
• Genome accession: NZ_CP095740
• Coordinates: 1347272..1348438 (+)
• Length: 388 a.a.
• NCBI ID: WP_247373787.1
• Uniprot ID: -
• Organism: Luteibacter aegosomatis strain 321
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1342272..1353438

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Y94_RS06180 (L2Y94_06180)	-	1342356..1344464 (+)	2109	WP_247373780.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
L2Y94_RS06185 (L2Y94_06185)	-	1344594..1345169 (-)	576	WP_247373782.1	YggT family protein	-
L2Y94_RS06190 (L2Y94_06190)	proC	1345166..1345990 (-)	825	WP_247373784.1	pyrroline-5-carboxylate reductase	-
L2Y94_RS06195 (L2Y94_06195)	pilT	1346109..1347146 (+)	1038	WP_247373786.1	type IV pilus twitching motility protein PilT	Machinery gene
L2Y94_RS06200 (L2Y94_06200)	pilU	1347272..1348438 (+)	1167	WP_247373787.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
L2Y94_RS06205 (L2Y94_06205)	-	1348641..1349006 (-)	366	WP_247373789.1	BON domain-containing protein	-
L2Y94_RS06210 (L2Y94_06210)	-	1349232..1350980 (-)	1749	WP_247373790.1	hypothetical protein	-
L2Y94_RS06215 (L2Y94_06215)	-	1351083..1352009 (-)	927	WP_247373792.1	aspartate carbamoyltransferase catalytic subunit	-
L2Y94_RS06220 (L2Y94_06220)	ruvX	1352044..1352460 (-)	417	WP_247373794.1	Holliday junction resolvase RuvX	-
L2Y94_RS06225 (L2Y94_06225)	-	1352465..1353031 (-)	567	WP_144911290.1	YqgE/AlgH family protein	-

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 43422.70 Da
• Isoelectric Point: 6.9605

>NTDB_id=677956 L2Y94_RS06200 WP_247373787.1 1347272..1348438(+) (pilU) [Luteibacter aegosomatis strain 321]
MSEFDFTSFLKLMVHKQASDLFITAGVAPSMKVQGRIVPITQSPLSAQQSRDMVLNVMTPAQREEFEKTHECQFAISASG
IGRFRVSCFYQRNCVGMVLRRIESKIPTVDELSLPPIVKQLAMTKRGIIIFVGGTGTGKSTSLAAMIGYRNQNSTGHIIT
IEDPIEYVHRHEGCIITQRELGIDTDSWENALKNTLRQAPDVIMIGEVRTRETMEHAINFSETGHLCLCTLHANNANQAL
DRILHFFPEDRRQQLFMDLSLNLKGIVAQQLIPTPDGKARRVAVEVLLGTPLAQDYIRQGEVHKLKELMRDSNQLGMRTF
DQSLVELFHAGEISYEDALRHADSTNEVRLRIKLAQGGDAHTLSQGLEGVEIEKADDRNGFNGGVLRR

Nucleotide

• Length: 1167 bp

>NTDB_id=677956 L2Y94_RS06200 WP_247373787.1 1347272..1348438(+) (pilU) [Luteibacter aegosomatis strain 321]
ATGAGCGAATTCGATTTCACTTCCTTCCTCAAGCTGATGGTGCACAAGCAGGCGTCGGACCTGTTCATCACCGCCGGCGT
GGCGCCTTCGATGAAGGTGCAGGGCCGCATCGTGCCCATCACGCAGAGCCCGCTGTCCGCGCAGCAGTCGCGCGACATGG
TGCTCAACGTGATGACGCCCGCGCAGCGCGAGGAGTTCGAGAAGACCCACGAATGCCAGTTCGCGATCAGCGCGTCGGGC
ATCGGCCGTTTCCGCGTATCGTGTTTCTACCAGCGCAATTGCGTGGGCATGGTGCTGCGCCGGATCGAGTCGAAGATCCC
CACCGTGGACGAGCTGAGCCTGCCTCCCATCGTCAAGCAGCTGGCGATGACCAAGCGCGGCATCATCATCTTCGTCGGTG
GCACGGGCACCGGTAAGTCGACCTCGCTGGCCGCGATGATCGGCTACCGCAACCAGAACTCCACCGGTCACATCATCACG
ATCGAAGACCCGATCGAATACGTGCATCGCCACGAGGGCTGCATCATCACGCAGCGCGAGCTGGGCATCGATACCGACAG
CTGGGAAAACGCGCTGAAGAACACGCTGCGCCAGGCACCCGACGTGATCATGATCGGCGAGGTGCGCACGCGCGAGACGA
TGGAACACGCCATCAACTTCTCCGAAACGGGCCATCTCTGCCTGTGCACGCTGCACGCGAACAACGCCAACCAGGCGCTG
GACCGCATCCTGCACTTCTTCCCGGAAGACCGCCGCCAGCAGCTGTTCATGGACCTGTCGCTGAACCTGAAGGGCATCGT
GGCCCAGCAGCTGATTCCCACGCCCGACGGCAAGGCGCGTCGCGTGGCGGTGGAAGTGCTGCTCGGCACGCCGCTGGCGC
AGGACTATATCCGCCAGGGTGAGGTGCACAAGCTGAAGGAACTGATGCGCGACTCCAACCAGCTCGGCATGCGTACGTTC
GACCAGAGCCTCGTTGAGCTCTTTCACGCGGGCGAGATCTCCTACGAGGATGCCCTGCGCCACGCCGACAGCACCAACGA
GGTGCGCCTGCGCATCAAGCTCGCCCAGGGCGGCGATGCGCACACCTTGTCGCAGGGGTTGGAAGGGGTGGAAATCGAGA
AGGCGGACGACCGCAACGGGTTCAACGGCGGCGTGTTGCGGCGTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (108-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	66.313	97.165	0.644
pilU	Acinetobacter baylyi ADP1	63.025	92.01	0.58
pilU	Vibrio cholerae strain A1552	51.351	95.361	0.49
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.467	96.649	0.381