Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   OG207_RS00370 Genome accession   NZ_CP109487
Coordinates   69178..69753 (-) Length   191 a.a.
NCBI ID   WP_329094739.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01439     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 64178..74753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG207_RS00335 (OG207_00335) - 64190..64549 (-) 360 WP_329094727.1 hypothetical protein -
  OG207_RS00340 (OG207_00340) - 64546..65163 (-) 618 WP_329094728.1 hypothetical protein -
  OG207_RS00345 (OG207_00345) - 65287..66042 (+) 756 WP_329094730.1 transposase family protein -
  OG207_RS00350 (OG207_00350) - 66154..66630 (-) 477 WP_329094733.1 Imm1 family immunity protein -
  OG207_RS00355 (OG207_00355) - 66894..67649 (-) 756 WP_329094730.1 transposase family protein -
  OG207_RS00360 (OG207_00360) - 67712..68305 (-) 594 WP_329094735.1 hypothetical protein -
  OG207_RS00365 (OG207_00365) - 68378..69148 (-) 771 WP_329094738.1 transposase -
  OG207_RS00370 (OG207_00370) stkP/pknB 69178..69753 (-) 576 WP_329094739.1 serine/threonine-protein kinase Regulator
  OG207_RS00375 (OG207_00375) - 71088..71927 (+) 840 WP_329094742.1 IS5 family transposase -
  OG207_RS00380 (OG207_00380) - 72389..73641 (+) 1253 WP_329094744.1 IS3 family transposase -
  OG207_RS00385 (OG207_00385) - 73766..74616 (+) 851 Protein_76 transposase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21011.15 Da        Isoelectric Point: 6.6954

>NTDB_id=677530 OG207_RS00370 WP_329094739.1 69178..69753(-) (stkP/pknB) [Streptomyces sp. NBC_01439]
MYRGMELAGRYRLDSRLGHGGMGEVWVASDLRLRRTVAIKMVLASHLRDDRLAAQVLARFRREGEAAARLNHRNIAVVHD
LGEHKETQYDGQVEVSPFLVMEFLEGRDLATVLRDEHPGGLPPEKVLEYGAQVCDGLAAAHARNIVHRDIKPANLMLLDD
GTVKICDFGIVQIQDGTIGLTTAGALLSVVP

Nucleotide


Download         Length: 576 bp        

>NTDB_id=677530 OG207_RS00370 WP_329094739.1 69178..69753(-) (stkP/pknB) [Streptomyces sp. NBC_01439]
ATGTACAGGGGGATGGAACTGGCGGGCCGCTACCGACTCGACAGCCGGTTGGGGCACGGCGGTATGGGCGAGGTGTGGGT
AGCGTCCGACCTGAGGCTGCGCCGCACCGTCGCGATCAAGATGGTTCTCGCCTCACATCTGCGCGACGACCGACTCGCCG
CCCAGGTCCTGGCCCGCTTCCGCCGTGAAGGCGAGGCGGCCGCCAGGCTGAACCACCGCAACATCGCCGTCGTCCACGAC
CTCGGCGAGCACAAGGAGACGCAATATGACGGGCAGGTGGAAGTCTCCCCGTTCCTCGTCATGGAGTTCCTGGAAGGGCG
TGATCTCGCGACGGTTCTGCGCGACGAGCACCCCGGCGGGCTTCCCCCCGAGAAGGTGCTGGAGTACGGTGCCCAGGTGT
GCGACGGGCTGGCCGCCGCCCACGCGCGGAACATCGTGCACCGCGACATCAAGCCCGCCAACCTCATGCTGCTCGACGAC
GGCACCGTCAAGATCTGCGACTTCGGGATCGTCCAGATCCAGGACGGCACGATCGGCCTGACCACGGCCGGAGCGCTACT
AAGCGTTGTCCCGTAA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-175)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

39.894

98.429

0.393
  pknB Streptococcus mutans UA159

39.362

98.429

0.387
  stkP Streptococcus pneumoniae D39

37.766

98.429

0.372
  stkP Streptococcus pneumoniae R6

37.766

98.429

0.372
  stkP Streptococcus pneumoniae TIGR4

37.766

98.429

0.372
  stkP Streptococcus pneumoniae Rx1

37.766

98.429

0.372