Detailed information NTG0676306

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MRO13_RS13910
• Genome accession: NZ_CP095311
• Coordinates: 3011396..3012919 (+)
• Length: 507 a.a.
• NCBI ID: WP_154169663.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 20CO01TI02
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3006396..3017919

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRO13_RS13895 (MRO13_13815)	ilvE	3008008..3008949 (-)	942	WP_004397593.1	branched-chain-amino-acid transaminase	-
MRO13_RS13900 (MRO13_13820)	ilvM	3008962..3009246 (-)	285	WP_004397591.1	acetolactate synthase 2 small subunit	-
MRO13_RS13905 (MRO13_13825)	ilvG	3009246..3010892 (-)	1647	WP_170905015.1	acetolactate synthase 2 catalytic subunit	-
MRO13_RS13910 (MRO13_13830)	comM	3011396..3012919 (+)	1524	WP_154169663.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MRO13_RS13915 (MRO13_13835)	-	3013064..3013664 (-)	601	Protein_2652	thiol:disulfide interchange protein DsbA/DsbL	-
MRO13_RS13920 (MRO13_13840)	-	3013698..3014684 (-)	987	WP_350939886.1	serine/threonine protein kinase	-
MRO13_RS13925 (MRO13_13845)	-	3014784..3015053 (-)	270	WP_004397581.1	YihD family protein	-
MRO13_RS13930 (MRO13_13850)	-	3015274..3015441 (-)	168	WP_110168332.1	hypothetical protein	-
MRO13_RS13935 (MRO13_13855)	-	3015724..3016368 (+)	645	WP_040905819.1	hemolysin III family protein	-
MRO13_RS13940 (MRO13_13860)	-	3016393..3017838 (-)	1446	WP_004397575.1	TrkH family potassium uptake protein	-

Sequence

Protein

• Length: 507 a.a.
• Molecular weight: 55303.38 Da
• Isoelectric Point: 7.3634

>NTDB_id=676306 MRO13_RS13910 WP_154169663.1 3011396..3012919(+) (comM) [Vibrio metschnikovii strain 20CO01TI02]
MGLAIIHSRASIGVQAPEVTVEVHISNGMPGFTLVGLPETTVKESKDRVRSAIINSRFEFPAKRITVNLAPADLPKEGGR
FDLPIALGILAASEQIPHTHLAAYEFIGELALSGEIRRVKGVLPAALAANHAQRSLVVPQDNGDQAALVGESNHKSAQNL
LEVCADLCGQKNLTLFQSEPIVQPPDHSRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSE
EEAMETASVASLTQQEINQYNWKRRPFRSPHHSSSMAALVGGGTIPRPGEISLAHNGLLFLDEMPEFERKVLDSLREPLE
SGEIIISRAQGKTRFPARFQLVGALNPSPTGYYEGNQARVNPQVILRYLSRLSGPLLDRFDMSIEIPALPKGTLSQGGDR
GETTEVVRQRVQIARERMLARSGKVNGLLQSREIDIFCPLARSDAEFLEAALHRLGLSVRAYHRIIKVARTIADLEGVAD
IQRSHLAEALGYRAMDRLLKQLVAQAV

Nucleotide

• Length: 1524 bp

>NTDB_id=676306 MRO13_RS13910 WP_154169663.1 3011396..3012919(+) (comM) [Vibrio metschnikovii strain 20CO01TI02]
ATGGGCCTTGCGATTATTCATAGCCGAGCCAGTATTGGCGTCCAAGCACCAGAAGTCACTGTCGAAGTACACATCAGTAA
CGGCATGCCCGGCTTCACCTTAGTCGGCCTCCCCGAAACCACGGTGAAAGAATCCAAAGACCGAGTGCGCAGTGCGATCA
TTAACTCACGCTTCGAGTTTCCCGCTAAACGAATTACCGTTAACTTAGCACCTGCCGATCTCCCCAAGGAGGGAGGCCGG
TTTGATTTACCCATCGCTCTGGGGATTTTAGCTGCGTCTGAACAAATACCTCACACTCATTTAGCCGCTTATGAGTTTAT
TGGTGAGCTGGCATTGTCGGGAGAAATCAGGCGCGTTAAGGGGGTTTTGCCCGCGGCATTGGCAGCGAATCATGCTCAAC
GCAGTTTGGTCGTACCGCAAGATAACGGCGATCAAGCGGCGTTAGTCGGTGAAAGCAACCATAAATCCGCACAAAACCTG
TTAGAAGTTTGCGCGGATTTATGTGGTCAAAAAAACTTAACGCTCTTTCAAAGCGAACCGATTGTACAACCACCCGATCA
CTCTCGAGATCTACAAGATATTATTGGTCAACAACAAGGAAAACGAGCACTGGAAATTGCCGCAGCAGGGAATCATAACT
TGCTATTTCTTGGCCCTCCGGGGACCGGGAAAACCATGCTCGCATCACGGCTGTGTGATTTACTACCAGAAATGAGCGAA
GAGGAAGCGATGGAAACCGCCTCTGTCGCCTCGCTGACCCAGCAGGAGATCAATCAATACAACTGGAAACGTCGTCCTTT
TCGGTCACCACACCACTCAAGCTCGATGGCAGCCTTAGTTGGCGGCGGTACGATTCCACGGCCAGGAGAAATCTCATTAG
CCCATAACGGCCTATTGTTTCTCGACGAAATGCCTGAATTTGAACGAAAAGTGCTTGATTCACTCCGCGAGCCTCTTGAA
TCAGGAGAGATTATTATTTCACGCGCCCAAGGTAAAACTCGCTTTCCGGCACGCTTTCAACTGGTGGGCGCACTCAATCC
TAGCCCTACTGGCTATTATGAGGGCAACCAAGCAAGGGTTAACCCGCAAGTGATCCTGCGCTATTTAAGTCGACTTTCTG
GCCCTTTGCTAGACCGATTTGATATGTCGATTGAAATTCCTGCGCTACCAAAAGGGACGTTATCTCAAGGCGGTGATCGA
GGAGAAACAACGGAGGTGGTACGGCAACGAGTACAGATCGCGCGCGAACGAATGCTGGCGCGCAGTGGTAAGGTTAACGG
GCTGCTGCAAAGTCGTGAGATTGATATTTTTTGCCCATTAGCTCGCTCGGATGCAGAGTTCTTAGAAGCGGCATTGCATC
GCTTAGGCTTATCCGTCCGCGCTTATCACCGGATCATTAAAGTGGCACGGACTATCGCAGATTTAGAAGGCGTAGCCGAT
ATTCAGCGGTCACATCTGGCGGAAGCGCTCGGCTATCGAGCAATGGATAGGCTACTCAAACAATTGGTTGCGCAGGCTGT
TTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	87.771	100	0.878
comM	Vibrio campbellii strain DS40M4	84.615	100	0.846
comM	Haemophilus influenzae Rd KW20	65.415	99.803	0.653
comM	Glaesserella parasuis strain SC1401	65.217	99.803	0.651
comM	Legionella pneumophila str. Paris	50.403	97.83	0.493
comM	Legionella pneumophila strain ERS1305867	50.403	97.83	0.493
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.504	100	0.436