Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | NOS3756_RS25195 | Genome accession | NZ_AP017295 |
| Coordinates | 6060456..6060821 (+) | Length | 121 a.a. |
| NCBI ID | WP_010995103.1 | Uniprot ID | Q8YYC1 |
| Organism | Nostoc sp. NIES-3756 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6055456..6065821
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOS3756_RS25180 (NOS3756_51970) | tilS | 6055549..6056676 (+) | 1128 | WP_067774314.1 | tRNA lysidine(34) synthetase TilS | - |
| NOS3756_RS25185 (NOS3756_51980) | hmpF | 6056745..6058496 (-) | 1752 | WP_067774317.1 | pilus motility taxis protein HmpF | - |
| NOS3756_RS25190 (NOS3756_51990) | - | 6058885..6060078 (+) | 1194 | WP_067774320.1 | response regulator | - |
| NOS3756_RS25195 (NOS3756_52000) | pilH | 6060456..6060821 (+) | 366 | WP_010995103.1 | response regulator | Machinery gene |
| NOS3756_RS25200 (NOS3756_52010) | - | 6060835..6061365 (+) | 531 | WP_067774323.1 | chemotaxis protein CheW | - |
| NOS3756_RS25205 (NOS3756_52020) | - | 6061383..6064232 (+) | 2850 | WP_067776213.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13396.55 Da Isoelectric Point: 4.7266
>NTDB_id=67600 NOS3756_RS25195 WP_010995103.1 6060456..6060821(+) (pilH) [Nostoc sp. NIES-3756]
MSTVLIVEDSLAQREMITDLLKASGLTVTHATDGLEALEAIKEEPPDLVVLDIVMPKMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSTVLIVEDSLAQREMITDLLKASGLTVTHATDGLEALEAIKEEPPDLVVLDIVMPKMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=67600 NOS3756_RS25195 WP_010995103.1 6060456..6060821(+) (pilH) [Nostoc sp. NIES-3756]
ATGAGTACAGTTCTGATTGTGGAAGACAGTCTTGCACAGAGGGAGATGATTACAGACCTCCTGAAGGCTAGCGGCTTAAC
AGTCACTCACGCAACCGACGGATTAGAAGCACTAGAGGCGATTAAAGAAGAACCTCCTGATCTAGTCGTTTTAGATATTG
TCATGCCGAAAATGAACGGCTATGAAGTTTGTCGGCGCTTGAAATCAGACCCGAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGGGAAGAATTTGACCGCTATTGGGGGATGAAACAAGGCGCGGATGCTTACATAGCAAAACCGTTTCA
GCCTACCGAATTGGTAGGAACAGTCAAACAACTACTGCGAGGATAA
ATGAGTACAGTTCTGATTGTGGAAGACAGTCTTGCACAGAGGGAGATGATTACAGACCTCCTGAAGGCTAGCGGCTTAAC
AGTCACTCACGCAACCGACGGATTAGAAGCACTAGAGGCGATTAAAGAAGAACCTCCTGATCTAGTCGTTTTAGATATTG
TCATGCCGAAAATGAACGGCTATGAAGTTTGTCGGCGCTTGAAATCAGACCCGAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGGGAAGAATTTGACCGCTATTGGGGGATGAAACAAGGCGCGGATGCTTACATAGCAAAACCGTTTCA
GCCTACCGAATTGGTAGGAACAGTCAAACAACTACTGCGAGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
75.207 |
100 |
0.752 |
| vicR | Streptococcus mutans UA159 |
40 |
99.174 |
0.397 |
| micA | Streptococcus pneumoniae Cp1015 |
40 |
99.174 |
0.397 |
| pilG | Acinetobacter baumannii strain A118 |
40.351 |
94.215 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
37.19 |
100 |
0.372 |