Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   MP619_RS11525 Genome accession   NZ_CP095081
Coordinates   2321306..2322526 (+) Length   406 a.a.
NCBI ID   WP_129555130.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2316306..2327526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS11510 (MP619_11480) - 2319259..2320281 (+) 1023 WP_129555386.1 IS30 family transposase -
  MP619_RS11520 (MP619_11490) rlmH 2320617..2321096 (-) 480 WP_129555129.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MP619_RS11525 (MP619_11495) htrA 2321306..2322526 (+) 1221 WP_129555130.1 trypsin-like peptidase domain-containing protein Regulator
  MP619_RS11530 (MP619_11500) spo0J 2322642..2323415 (+) 774 WP_129555131.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 406 a.a.        Molecular weight: 42440.79 Da        Isoelectric Point: 5.0584

>NTDB_id=675122 MP619_RS11525 WP_129555130.1 2321306..2322526(+) (htrA) [Streptococcus dysgalactiae strain WJ001]
MPSMKHILKSLGILLIGFLGGLLAIFTFNATQQSSSTSHTGSATTSKMVFNNTTDTTKAVKVVQNAVVSVINYQADPSSS
LSNPYTKLFGEDQTRENKDADLAIFSEGSGVIYRKDGDSAYVVTNNHVIDGAKRIEILMADGTKVVGELVGADTYSDLAV
VKIASDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTEGIVSSLSRTVTLKNEDGETVSTNAIQTDAAINPGNSG
GPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSSDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQI
NIPTGVTGGIVVASVQDGMPASGKLAQYDVITEIDGKAVNSISDLQSNLYGHDINDTIKVTFYRGTTKKKADITLTKTTQ
DLTKKQ

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=675122 MP619_RS11525 WP_129555130.1 2321306..2322526(+) (htrA) [Streptococcus dysgalactiae strain WJ001]
ATGCCATCTATGAAACATATCTTAAAATCCTTAGGCATTTTACTCATTGGATTTTTAGGAGGATTGTTAGCAATTTTCAC
CTTTAATGCTACTCAACAGTCTTCCTCTACCTCACATACTGGTAGTGCGACGACGAGTAAGATGGTTTTTAATAATACTA
CTGACACAACAAAAGCGGTTAAAGTCGTTCAAAATGCAGTAGTATCAGTGATTAACTATCAAGCAGATCCTTCTTCATCT
CTTTCAAATCCCTACACAAAACTCTTTGGTGAAGATCAAACAAGAGAAAATAAAGATGCCGACTTAGCAATTTTTAGTGA
AGGTTCTGGTGTTATTTATCGAAAAGACGGTGATTCTGCATATGTTGTTACTAATAATCACGTCATTGACGGCGCAAAGC
GAATTGAAATTCTTATGGCAGACGGTACCAAAGTCGTAGGGGAGTTAGTTGGAGCTGATACTTACTCTGACTTAGCGGTT
GTTAAAATTGCCTCAGATAAAATTAAGACAGTTGCTGAATTTGCAGATTCTACTAAACTGAATGTCGGAGAAGTTGCTAT
CGCAATTGGTAGCCCATTAGGAACTCAGTATGCCAATTCTGTTACAGAAGGAATTGTTTCTAGTCTCAGTCGTACCGTCA
CCTTAAAAAATGAAGATGGGGAAACTGTTTCAACAAATGCCATTCAAACTGATGCTGCAATCAATCCCGGAAATTCTGGT
GGTCCGCTCATCAATATTGAAGGACAGGTTATTGGTATCAATTCAAGTAAAATTTCTTCTACCCCAACAGGAAGCAACGG
CAATAGTGGAGCGGTTGAGGGTATCGGTTTTGCTATTCCATCCAGTGATGTCATTAAAATCATTAAGCAATTAGAAACCA
ATGGTGAGGTTATCCGACCTGCCCTTGGAATCTCTATGGTTAATCTAAATGATTTATCAACGAATGCTCTCAGTCAAATT
AATATCCCTACTGGGGTGACGGGTGGTATTGTGGTCGCTTCTGTTCAAGATGGAATGCCAGCTAGTGGTAAACTTGCCCA
GTACGACGTTATTACTGAAATTGATGGTAAAGCCGTCAACTCAATCAGTGATCTTCAAAGCAACCTATATGGCCATGACA
TTAACGATACCATCAAGGTAACCTTTTATAGAGGGACAACCAAGAAAAAAGCAGATATTACCTTAACTAAAACAACCCAG
GATTTGACCAAAAAGCAGTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(300-395)

Trypsin-like peptidase domain (Trypsin_2)

(108-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.945

99.015

0.603
  htrA Streptococcus mitis NCTC 12261

54.657

100

0.549
  htrA Streptococcus pneumoniae Rx1

54.657

100

0.549
  htrA Streptococcus pneumoniae TIGR4

54.657

100

0.549
  htrA Streptococcus pneumoniae D39

54.657

100

0.549
  htrA Streptococcus pneumoniae R6

54.657

100

0.549
  htrA Streptococcus gordonii str. Challis substr. CH1

54.703

99.507

0.544